RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR5B17Q8NGF7 314 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 RNASE11Q8TAA1 199 aaKnown RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 SPPL2BQ8TCT7 592 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 KLF14Q8TD94 323 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM172AQ8WUF8 416 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 KCTD4Q8WVF5 259 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 DEDD2Q8WXF8 326 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 MAFIPQ8WZ33 124 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 AP3S1Q92572 193 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 PPCDCQ96CD2 204 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 CMTM5Q96DZ9 223 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 HBEGFQ99075 208 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 DHRS9Q9BPW9 319 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 PARD6GQ9BYG4 376 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 XPNPEP1Q9NQW7 623 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 GID8Q9NWU2 228 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 GINS2Q9Y248 185 aa1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 POLR3HQ9Y535 204 aaPredicted RBP1.81□□□□□ -2.12
SHCBP1-202ENST00000563219 IGKV1OR2-108A0A075B7D4 117 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 IGHV3-21A0A0B4J1V1 117 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 IGHV3-43A0A0B4J1X8 118 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 A0A1W2PQ67 120 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 OR5H14A6NHG9 310 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 TMEM238C9JI98 176 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CCRL2O00421 344 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 PHYHO14832 338 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 NDUFA2O43678 99 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 SYNGR1O43759 233 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 UGT2B11O75310 529 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 LYPLA2O95372 231 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 KRT75O95678 551 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 APOC1P02654 83 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 PFN1P07737 140 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 FBP1P09467 338 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CGB3P0DN86 165 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CGB7P0DN87 165 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 PSKH1P11801 424 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CD99P14209 185 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CXCL3P19876 107 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 PPP1CCP36873 323 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CAPZBP47756 277 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 PSME3P61289 254 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 ENDOGQ14249 297 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 LGALSLQ3ZCW2 172 aaPredicted RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 TRMT12Q53H54 448 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 MESTQ5EB52 335 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 TMEM69Q5SWH9 247 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 HENMT1Q5T8I9 393 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 HES3Q5TGS1 186 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 SPATA31B1PQ5VZV4 182 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 LPCAT4Q643R3 524 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 ZNF660Q6AZW8 331 aaPredicted RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 EBLN2Q6P2I7 272 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 SPINT4Q6UDR6 99 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 IDO2Q6ZQW0 420 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 NATD1Q8N6N6 113 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 C12orf29Q8N999 325 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 OR2D3Q8NGH3 330 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 OR9I1Q8NGQ6 314 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 STOML3Q8TAV4 291 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 NEK7Q8TDX7 302 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CYGBQ8WWM9 190 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 RASSF5Q8WWW0 418 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 BORCS5Q969J3 196 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 APOBEC3DQ96AK3 386 aaPredicted RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 DGCR14Q96DF8 476 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 TCEAL4Q96EI5 215 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 PACRGQ96M98 296 aaPredicted RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 OR2V2Q96R30 315 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 EBNA1BP2Q99848 306 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 MROQ9BYG7 248 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 MRPS26Q9BYN8 205 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 ARL6Q9H0F7 186 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 MS4A6AQ9H2W1 248 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 TAS2R9Q9NYW1 312 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 ZNF492Q9P255 531 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 GLS2Q9UI32 602 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 SLC22A13Q9Y226 551 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 FAM32AQ9Y421 112 aaKnown RBP1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 CPDO75976 1380 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 MYO15BQ96JP2 1530 aa1.8□□□□□ -2.12
SHCBP1-202ENST00000563219 LEUTXA8MZ59 168 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 H0Y980 276 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 KPNA3O00505 521 aaPredicted RBP1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 PFDN6O15212 129 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 SLC16A4O15374 487 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 EEF1E1O43324 174 aaKnown RBP1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 CST8O60676 142 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 POP7O75817 140 aaKnown RBP1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 IGHG2P01859 326 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 IGHMP01871 453 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 HLA-AP01891 365 aaKnown RBP1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 TYMSP04818 313 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 NQO1P15559 274 aaKnown RBP1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 CXCL2P19875 107 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 GADD45AP24522 165 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 CD34P28906 385 aa1.79□□□□□ -2.12
SHCBP1-202ENST00000563219 CRABP1P29762 137 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms