RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TPRX1Q8N7U7 411 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 OR13A1Q8NGR1 328 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 NINJ1Q92982 152 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 SCNM1Q9BWG6 230 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 OR2D2Q9H210 308 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 Q9UFV3 132 aa8.21□□□□□ -1.09
SMG1-205ENST00000561947 IGKV1D-17A0A075B6S4 117 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 KIAA1324LA8MWY0 1029 aaPredicted RBP8.21□□□□□ -1.1
SMG1-205ENST00000561947 IGKV1-5P01602 117 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 DANCRP0C864 163 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 CCKARP32238 428 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 ASCL1P50553 236 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 F2RL1P55085 397 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 PAX9P55771 341 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 DEFA5Q01523 94 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 BAXQ07812 192 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 BTN1A1Q13410 526 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 ZNF266Q14584 549 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 MSMO1Q15800 293 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 SPRNQ5BIV9 151 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 TRAT1Q6PIZ9 186 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 Q6ZRM9 215 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 C22orf34Q6ZV56 151 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 MOGAT3Q86VF5 341 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 GCSAMQ8N6F7 178 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 LRRC46Q96FV0 321 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 CACNG5Q9UF02 275 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 RNF150Q9ULK6 438 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 CUL9Q8IWT3 2517 aa8.21□□□□□ -1.1
SMG1-205ENST00000561947 SPRY3O43610 288 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 OMGP23515 440 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 CD40P25942 277 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 SSTR5P35346 364 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 EIF4EBP1Q13541 118 aaPredicted RBP8.2□□□□□ -1.1
SMG1-205ENST00000561947 CLINT1Q14677 625 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 IZUMO4Q1ZYL8 232 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 FAM53AQ6NSI3 398 aaPredicted RBP8.2□□□□□ -1.1
SMG1-205ENST00000561947 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 HSD17B11Q8NBQ5 300 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 LYPD6BQ8NI32 183 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 ITLN1Q8WWA0 313 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 C5orf30Q96GV9 206 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 MRPL37Q9BZE1 423 aaKnown RBP8.2□□□□□ -1.1
SMG1-205ENST00000561947 SH3BGRL3Q9H299 93 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 CADP27708 2225 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 DSPP15924 2871 aaKnown RBP8.2□□□□□ -1.1
SMG1-205ENST00000561947 K7ENP7 123 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 ATG12O94817 140 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 ADCYAP1P18509 176 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 PPP1CCP36873 323 aaKnown RBP8.2□□□□□ -1.1
SMG1-205ENST00000561947 RAB5CP51148 216 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 DYNLT3P51808 116 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 EDDM3AQ14507 147 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 GFRALQ6UXV0 394 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 PPP1R35Q8TAP8 253 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 SNX22Q96L94 193 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 RAB40CQ96S21 281 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 TMEM231Q9H6L2 316 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 ESRP2Q9H6T0 727 aaKnown RBP8.2□□□□□ -1.1
SMG1-205ENST00000561947 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 BOD1L1Q8NFC6 3051 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 MGAQ8IWI9 3026 aa8.2□□□□□ -1.1
SMG1-205ENST00000561947 IGHV3OR15-7A0A075B7D8 119 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 C15orf65H3BRN8 121 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 SPINT2O43291 252 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 LHBP01229 141 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 MUC1P15941 1255 aaPredicted RBP8.19□□□□□ -1.1
SMG1-205ENST00000561947 GATA4P43694 442 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ID4P47928 161 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 SELENOVP59797 346 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
SMG1-205ENST00000561947 C10orf91Q5T1B1 145 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ZGRF1Q86YA3 2104 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ZNF295-AS1Q8N0V1 137 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 SPAG16Q8N0X2 631 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ZNF808Q8N4W9 903 aaPredicted RBP8.19□□□□□ -1.1
SMG1-205ENST00000561947 OR5C1Q8NGR4 320 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 CACFD1Q9UGQ2 172 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 STRAPQ9Y3F4 350 aaKnown RBP8.19□□□□□ -1.1
SMG1-205ENST00000561947 MGST3O14880 152 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 CST7O76096 145 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ADH4P08319 380 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ARHGDIBP52566 201 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 HTD2P86397 168 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 CATR1Q13166 79 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 DCTN5Q9BTE1 182 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 UQCC1Q9NVA1 299 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 ZNF835Q9Y2P0 537 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 CARHSP1Q9Y2V2 147 aaKnown RBP8.19□□□□□ -1.1
SMG1-205ENST00000561947 FAM96BQ9Y3D0 163 aa8.19□□□□□ -1.1
SMG1-205ENST00000561947 IGHV3-43A0A0B4J1X8 118 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 ODAMA1E959 279 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 F8W036 122 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 TXNL1O43396 289 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 IGHV3-43DP0DP04 118 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 CAMLGP49069 296 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 RPL30P62888 115 aaKnown RBP8.18□□□□□ -1.1
SMG1-205ENST00000561947 NUP37Q8NFH4 326 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms