RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 MEX3BQ6ZN04 569 aaKnown RBP15.98■□□□□ 0.15
RAB40C-206ENST00000561781 TCF24Q7RTU0 167 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 CADM4Q8NFZ8 388 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 RTN4RQ9BZR6 473 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 ARRDC1-AS1Q9H2J1 176 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 ELOVL5Q9NYP7 299 aa15.98■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF850A8MQ14 1090 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 SMPD2O60906 423 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 NPIPB7O75200 414 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF253O75346 499 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 DXOO77932 396 aaKnown RBP15.97■□□□□ 0.15
RAB40C-206ENST00000561781 ABHD12BQ7Z5M8 362 aaPredicted RBP15.97■□□□□ 0.15
RAB40C-206ENST00000561781 OR52L2PQ8NGH6 319 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 PTRH2Q9Y3E5 179 aaKnown RBP15.97■□□□□ 0.15
RAB40C-206ENST00000561781 PHF3Q92576 2039 aaKnown RBP15.97■□□□□ 0.15
RAB40C-206ENST00000561781 PCNX3Q9H6A9 2034 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 ZNF891A8MT65 544 aaPredicted RBP15.97■□□□□ 0.15
RAB40C-206ENST00000561781 MT-ATP6P00846 226 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 NRASP01111 189 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 KRASP01116 189 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 GPX1P07203 203 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 CD27P26842 260 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 Q0VG73 95 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 C6orf201Q7Z4U5 140 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 OR4S2Q8NH73 311 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 VSIRQ9H7M9 311 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 GVINP1Q7Z2Y8 2422 aa15.97■□□□□ 0.15
RAB40C-206ENST00000561781 C9orf172C9J069 976 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 J3QW42 95 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 CFIP05156 583 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 GLB1P16278 677 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 NPBWR2P48146 333 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 FXYD4P59646 89 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 Q6ZSR6 202 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 LHX4Q969G2 390 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 OR6C1Q96RD1 312 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 VDAC3Q9Y277 283 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 CACNA1EQ15878 2313 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 LOC102724200A0A096LPH7 203 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-206ENST00000561781 GAGE12BA1L429 117 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 PLPP3O14495 311 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 UTS2O95399 124 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 IGHMP01871 453 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 CTSEP14091 401 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 CXorf66Q5JRM2 361 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-206ENST00000561781 RAET1LQ5VY80 246 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 DGAT2Q96PD7 388 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 RSG1Q9BU20 258 aa15.96■□□□□ 0.15
RAB40C-206ENST00000561781 CABIN1Q9Y6J0 2220 aa15.96■□□□□ 0.14
RAB40C-206ENST00000561781 TRAF3IP2O43734 574 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-206ENST00000561781 VAMP5O95183 116 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 TMEM50AO95807 157 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 NUDT14O95848 222 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 WNT2P09544 360 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 ZNF17P17021 662 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 RD3Q7Z3Z2 195 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 MUC15Q8N387 334 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 ZIC4Q8N9L1 334 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 TM2D1Q9BX74 207 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 PILRBQ9UKJ0 227 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 PTPRZ1P23471 2315 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-206ENST00000561781 IGKV1-9A0A0C4DH69 117 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 HCRTR1O43613 425 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 ANOS1P23352 680 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 GNRHRP30968 328 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 SPIN3Q5JUX0 258 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 Q5PR19 223 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 FAM71F2Q6NXP2 309 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 FAM57BQ71RH2 274 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 TCF23Q7RTU1 214 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 TSACCQ96A04 125 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-206ENST00000561781 PLA2G3Q9NZ20 509 aa15.95■□□□□ 0.14
RAB40C-206ENST00000561781 MLNRO43193 412 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 TNFSF15O95150 251 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 ID3Q02535 119 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 RBPJQ06330 500 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 ZNF468Q5VIY5 522 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-206ENST00000561781 OR11L1Q8NGX0 322 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 FAM103A1Q9BTL3 118 aaKnown RBP15.94■□□□□ 0.14
RAB40C-206ENST00000561781 FGF22Q9HCT0 170 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 SLC39A9Q9NUM3 307 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 RNF114Q9Y508 228 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 SLC33A1O00400 549 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-206ENST00000561781 SH2D1BO14796 132 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 ZNF133P52736 654 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-206ENST00000561781 TLE3Q04726 772 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 ZP4Q12836 540 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 DNM1P34Q6PK57 102 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 ZNF695Q8IW36 515 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 OR4F5Q8NH21 305 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 UHRF2Q96PU4 802 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 OR4F4Q96R69 305 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 APOOQ9BUR5 198 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 RBM24Q9BX46 236 aaKnown RBP15.94■□□□□ 0.14
RAB40C-206ENST00000561781 NRN1Q9NPD7 142 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 PLEKHJ1Q9NW61 149 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 CELSR3Q9NYQ7 3312 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 ADAMTS9Q9P2N4 1935 aa15.94■□□□□ 0.14
RAB40C-206ENST00000561781 C3orf85A0A1B0GTC6 90 aa15.93■□□□□ 0.14
RAB40C-206ENST00000561781 A0A1W2PR77 199 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms