RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SPRY3O43610 288 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 ATG12O94817 140 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 IGLV1-44P01699 117 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 HEXAP06865 529 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 EGR1P18146 543 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 PPP1CCP36873 323 aaKnown RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 EIF5AP63241 154 aaKnown RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 P2RY6Q15077 328 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 C21orf62-AS1Q17RA5 79 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 AKIRIN2Q53H80 203 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 TMEM182Q6ZP80 229 aaPredicted RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 BEND4Q6ZU67 534 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 ODF3L1Q8IXM7 274 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 C1orf162Q8NEQ5 155 aaPredicted RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 LRRC29Q8WV35 223 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 ABHD17AQ96GS6 310 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 UQCC1Q9NVA1 299 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 RAMP3O60896 148 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 GAPDHP04406 335 aaKnown RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 IAPPP10997 89 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 IL2RGP31785 369 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 EIF2S3P41091 472 aaKnown RBP8.92□□□□□ -0.98
CUX1-217ENST00000558836 RUNX1Q01196 453 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 GPR157Q5UAW9 335 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 IGFL3Q6UXB1 125 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 DRAM1Q8N682 238 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 TMEM252Q8N6L7 170 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 OR5D13Q8NGL4 314 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 CACNG5Q9UF02 275 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 NCOR2Q9Y618 2525 aa8.92□□□□□ -0.98
CUX1-217ENST00000558836 BORCS7-ASMTA0A0B4J1R7 106 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 TMEM210A6NLX4 147 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 HBZP02008 142 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 MDH2P40926 338 aaKnown RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 DYNLT3P51808 116 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 FOXC1Q12948 553 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 HNF4GQ14541 408 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ZNF273Q14593 569 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 MIDNQ504T8 468 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 KRBOX4Q5JUW0 171 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 CISD2Q8N5K1 135 aaKnown RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 CD177Q8N6Q3 437 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 LRFN3Q9BTN0 628 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 NKX6-2Q9C056 277 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 OR2D2Q9H210 308 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 HES4Q9HCC6 221 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 IGKV1-5P01602 117 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 PVALBP20472 110 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 KITLGP21583 273 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 S100GP29377 79 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ID3Q02535 119 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 OR13A1Q8NGR1 328 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 GALMQ96C23 342 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ABHD14BQ96IU4 210 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 SPIN2AQ99865 258 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 SPIN2BQ9BPZ2 258 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 C11orf1Q9H5F2 150 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 DSCAMO60469 2012 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 TMEM30CPA0ZSE6 113 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 RNASEK-C17orf49H0YIS7 233 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 TRIM77I1YAP6 450 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 DNASE2O00115 360 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 S100A6P06703 90 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 CAMLGP49069 296 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 PAX9P55771 341 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 RPL30P62888 115 aaKnown RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 ZNF816Q0VGE8 651 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 UQCC3Q6UW78 93 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 BTNL8Q6UX41 500 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 CBLN2Q8IUK8 224 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ZNRF1Q8ND25 227 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 SAT2Q96F10 170 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 FAM212BQ9NTI7 297 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 LYRM2Q9NU23 88 aaPredicted RBP8.91□□□□□ -0.98
CUX1-217ENST00000558836 WASF3Q9UPY6 502 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 WIPI2Q9Y4P8 454 aa8.91□□□□□ -0.98
CUX1-217ENST00000558836 ABCA4P78363 2273 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 KRASP01116 189 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 SPP1P10451 314 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 NFYBP25208 207 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 NBL1P41271 181 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 HMGN3Q15651 99 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 FAM213BQ8TBF2 198 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 C5orf30Q96GV9 206 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 OR2V2Q96R30 315 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 ZFP57Q9NU63 452 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 RNF115Q9Y4L5 304 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 COL6A6A6NMZ7 2263 aa8.9□□□□□ -0.98
CUX1-217ENST00000558836 GPR37O15354 613 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 TXNL1O43396 289 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 TSPAN15O95858 294 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 CRYAAP02489 173 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 SFTA3P0C7M3 94 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 360.7 ms