RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 RFPL4AL1F8VTS6 287 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 H0YJW9 148 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MFNGO00587 321 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 KPNA4O00629 521 aaPredicted RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 BET1O15155 118 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SOCS1O15524 211 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 CCNKO75909 580 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 YIF1AO95070 293 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 APCSP02743 223 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SERPINA7P05543 415 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF806P0C7X5 589 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 C1GALT1C1LP0DN25 315 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 CD79AP11912 226 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 CDC42P60953 191 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 RAB5BP61020 215 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 NAA20P61599 178 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 GRB2P62993 217 aaKnown RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 HIST1H3AP68431 136 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SLC35A2P78381 396 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 H3F3AP84243 136 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 ADIGQ0VDE8 80 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 CCL15Q16663 113 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 TRMT12Q53H54 448 aaKnown RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 KCTD16Q68DU8 428 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 LAMTOR1Q6IAA8 161 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 UGT2A3Q6UWM9 527 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 C5orf46Q6UWT4 87 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 NTM-AS1Q6ZSK4 140 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 HIST2H3AQ71DI3 136 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SMIM20Q8N5G0 67 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 NATD1Q8N6N6 113 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF676Q8N7Q3 588 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 OR4K5Q8NGD3 323 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 OR1L8Q8NGR8 309 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MFSD8Q8NHS3 518 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MCFD2Q8NI22 146 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 BLNKQ8WV28 456 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 C11orf40Q8WZ69 217 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 YIPF5Q969M3 257 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 NEURL3Q96EH8 262 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 DCUN1D1Q96GG9 259 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 PFDN5Q99471 154 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 FAAP24Q9BTP7 215 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MED18Q9BUE0 208 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SUCNR1Q9BXA5 334 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 DCSTAMPQ9H295 470 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 OPTCQ9UBM4 332 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF223Q9UK11 482 aaPredicted RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SLC35A3Q9Y2D2 325 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 PRELID3BQ9Y3B1 194 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 UFC1Q9Y3C8 167 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 NUBP2Q9Y5Y2 271 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 PHLPP1O60346 1717 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 ABCA3Q99758 1704 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 PLCH2O75038 1416 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 TCOF1Q13428 1488 aaKnown RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MAGI2Q86UL8 1455 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 ARHGAP5Q13017 1502 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 EIF2AK4Q9P2K8 1649 aaKnown RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IFT172Q9UG01 1749 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IGHV3-72A0A0B4J1Y9 119 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 A0A1W2PQ67 120 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 PINLYPA6NC86 204 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF98A6NK75 572 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 FAM159BA6NKW6 160 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 D6RAR5 112 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 I3L4J1 428 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 PFDN1O60925 122 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR7C1O76099 320 aaPredicted RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 MT-CO2P00403 227 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IGLV2-8P01709 118 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IGHV3-11P01762 117 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IGKV5-2P06315 115 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 TFPTP0C1Z6 253 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR10J4P0C629 311 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR56A5P0C7T3 313 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SULT1A3P0DMM9 295 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SULT1A4P0DMN0 295 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 PSG2P11465 335 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 SLC6A1P30531 599 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 TSPOP30536 169 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 PRSS3P35030 304 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 TAS2R43P59537 309 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 PFN3P60673 137 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 IFITM2Q01629 132 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 LOXL1Q08397 574 aaPredicted RBP2.06□□□□□ -2.08
TRAV28-201ENST00000557548 CDK10Q15131 360 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 RSU1Q15404 277 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 CLEC12AQ5QGZ9 265 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 TSPO2Q5TGU0 170 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 FAM78BQ5VT40 261 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 OR10K2Q6IF99 312 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 RPL13AP3Q6NVV1 102 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 FBXL22Q6P050 247 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 ZFP1Q6P2D0 407 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 GRINAQ7Z429 371 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 GLT6D1Q7Z4J2 308 aa2.06□□□□□ -2.08
TRAV28-201ENST00000557548 MKXQ8IYA7 352 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms