RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 SLC6A7Q99884 636 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 SRRQ9GZT4 340 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 RDH8Q9NYR8 311 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 MTFP1Q9UDX5 166 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 HSPA12AO43301 675 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 RBBP9O75884 186 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 NFYAP23511 347 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-227ENST00000557269 RCVRNP35243 200 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 RFX2P48378 723 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 PRRX1P54821 245 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 SPANXN2Q5MJ10 180 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 LY6G6FQ5SQ64 297 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 SLC25A48Q6ZT89 311 aaKnown RBP10.38□□□□□ -0.75
SHMT2-227ENST00000557269 ODF3L1Q8IXM7 274 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 H1FOOQ8IZA3 346 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-227ENST00000557269 LINC00311Q8N616 119 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 C8orf31Q8N9H6 132 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 OR5AP2Q8NGF4 316 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 OR10J5Q8NHC4 309 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 TOLLIPQ9H0E2 274 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-227ENST00000557269 MMP28Q9H239 520 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 AKIP1Q9NQ31 210 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 RABL2AQ9UBK7 228 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-227ENST00000557269 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
SHMT2-227ENST00000557269 RBMX2Q9Y388 322 aaKnown RBP10.38□□□□□ -0.75
SHMT2-227ENST00000557269 MTORP42345 2549 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 J3QRK9 145 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 M0QYG6 137 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 FAM157CP0CG43 387 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 HTR1DP28221 377 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 HRH1P35367 487 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 LGALS4P56470 323 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 BPIFB3P59826 476 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 ARPC4P59998 168 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 MRPS10P82664 201 aaKnown RBP10.37□□□□□ -0.75
SHMT2-227ENST00000557269 CDK10Q15131 360 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 Q3ZCU0 254 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 RBMXL1Q96E39 390 aaKnown RBP10.37□□□□□ -0.75
SHMT2-227ENST00000557269 AGMATQ9BSE5 352 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 THAP7Q9BT49 309 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-227ENST00000557269 ABHD14AQ9BUJ0 271 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 IFI27L2Q9H2X8 130 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 RNF150Q9ULK6 438 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 TBL2Q9Y4P3 447 aaKnown RBP10.37□□□□□ -0.75
SHMT2-227ENST00000557269 HILPDAQ9Y5L2 63 aa10.37□□□□□ -0.75
SHMT2-227ENST00000557269 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 RGS11O94810 467 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 DIRAS3O95661 229 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 CD3DP04234 171 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OR5H8P0DN80 308 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 PTBP1P26599 531 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHMT2-227ENST00000557269 FCGR2CP31995 323 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OR3A3P47888 321 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 SSX2Q16385 188 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 BAK1Q16611 211 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 PLA1AQ53H76 456 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 TPTE2P1Q5T6R2 138 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 ZNF660Q6AZW8 331 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OVCH2Q7RTZ1 564 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 LYG1Q8N1E2 194 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 Q8N402 240 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 SIGLECL1Q8N7X8 197 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OR2AK2Q8NG84 335 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OR4D10Q8NGI6 311 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OR5H2Q8NGV7 314 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 OR10X1Q8NGY0 326 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 TRIM63Q969Q1 353 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 ABHD14BQ96IU4 210 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 GINS4Q9BRT9 223 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 TINAGL1Q9GZM7 467 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-227ENST00000557269 NECAP2Q9NVZ3 263 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 DPM3Q9P2X0 92 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
SHMT2-227ENST00000557269 IGKV1D-13A0A0B4J2D9 117 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 LEUTXA8MZ59 168 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 ZNF736B4DX44 427 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-227ENST00000557269 ITGB1BP1O14713 200 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 PROP1O75360 226 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 TUSC2O75896 110 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 OR8U9P0C7N5 309 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 IGKV1-13P0DP09 117 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 AADACP22760 399 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 REG1BP48304 166 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 RAB13P51153 203 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 TAS2R46P59540 309 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 ACTBP60709 375 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 ACTG1P63261 375 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 ZNF45Q02386 682 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 DYRK1AQ13627 763 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 LINC00299Q6ZSB3 139 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 TMEM229BQ8NBD8 167 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 OR8U1Q8NH10 309 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 CREB3L1Q96BA8 519 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms