RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SMIM21Q3B7S5 101 aa20.35■□□□□ 0.85
TMEM260-207ENST00000555497 ABHD17AQ96GS6 310 aa20.35■□□□□ 0.85
TMEM260-207ENST00000555497 C5orf30Q96GV9 206 aa20.35■□□□□ 0.85
TMEM260-207ENST00000555497 FAM212BQ9NTI7 297 aaPredicted RBP20.35■□□□□ 0.85
TMEM260-207ENST00000555497 OOEPA6NGQ2 149 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 DANCRP0C864 163 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 GABRA2P47869 451 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 NKX6-1P78426 367 aaPredicted RBP20.34■□□□□ 0.85
TMEM260-207ENST00000555497 FAM27E3Q08E93 113 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 GUCA2BQ16661 112 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 KRTCAP3Q53RY4 240 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 LYPD6BQ8NI32 183 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 BSNQ9UPA5 3926 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 NBEAQ8NFP9 2946 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 A0A1B0GU03 582 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 C1QL1O75973 258 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 CST7O76096 145 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 VHLLQ6RSH7 139 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 CLRN3Q8NCR9 226 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 SFXN3Q9BWM7 321 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 UQCC1Q9NVA1 299 aa20.34■□□□□ 0.85
TMEM260-207ENST00000555497 ICE1Q9Y2F5 2266 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 MKRN2OSH3BPM6 223 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 IFNL4K9M1U5 179 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 IL2RGP31785 369 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 CD200P41217 278 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 KRBOX4Q5JUW0 171 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 C10orf91Q5T1B1 145 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 OR13A1Q8NGR1 328 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 DCTN5Q9BTE1 182 aa20.33■□□□□ 0.85
TMEM260-207ENST00000555497 ZGRF1Q86YA3 2104 aa20.33■□□□□ 0.84
TMEM260-207ENST00000555497 IGHV3-13P01766 116 aa20.33■□□□□ 0.84
TMEM260-207ENST00000555497 CRYAAP02489 173 aa20.33■□□□□ 0.84
TMEM260-207ENST00000555497 SLC25A6P12236 298 aa20.33■□□□□ 0.84
TMEM260-207ENST00000555497 FAM180AQ6UWF9 173 aa20.33■□□□□ 0.84
TMEM260-207ENST00000555497 MUCL1Q96DR8 90 aa20.33■□□□□ 0.84
TMEM260-207ENST00000555497 MMP9P14780 707 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 SSTR5P35346 364 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 F2RL1P55085 397 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 SWI5Q1ZZU3 235 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 TSNAXQ99598 290 aaKnown RBP20.32■□□□□ 0.84
TMEM260-207ENST00000555497 SLC25A31Q9H0C2 315 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 CACNG5Q9UF02 275 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 CACFD1Q9UGQ2 172 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 TP53TG5Q9Y2B4 290 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 USF3Q68DE3 2245 aa20.32■□□□□ 0.84
TMEM260-207ENST00000555497 FAM74A7A6NL05 159 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 C9JQL5 133 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 PRDX2P32119 198 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 GLRXP35754 106 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 PPP1CCP36873 323 aaKnown RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 DYNLT3P51808 116 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 FAM74A3Q4VXF1 159 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 PUSL1Q8N0Z8 303 aaKnown RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 OR5C1Q8NGR4 320 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 RNASE11Q8TAA1 199 aaKnown RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 LSM10Q969L4 123 aaKnown RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 NKX6-2Q9C056 277 aaPredicted RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 CUL9Q8IWT3 2517 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 IGKV1D-17A0A075B6S4 117 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 MED19A0JLT2 244 aaPredicted RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 A8MXE2 369 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 SRRM5B3KS81 715 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 F8W036 122 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 WRBO00258 174 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 BMP5P22003 454 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 TMEM217Q8N7C4 229 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 OR2D2Q9H210 308 aa20.31■□□□□ 0.84
TMEM260-207ENST00000555497 LIN7CQ9NUP9 197 aaKnown RBP20.31■□□□□ 0.84
TMEM260-207ENST00000555497 RNASEK-C17orf49H0YIS7 233 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 ZNF737O75373 536 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 F12P00748 615 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-207ENST00000555497 RPL30P62888 115 aaKnown RBP20.3■□□□□ 0.84
TMEM260-207ENST00000555497 ZNF645Q8N7E2 425 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 RFESDQ8TAC1 157 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 OR2V2Q96R30 315 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 SSUH2Q9Y2M2 353 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 CD5P06127 495 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 KLF3P57682 345 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-207ENST00000555497 MZT1Q08AG7 82 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 EIF4EBP1Q13541 118 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-207ENST00000555497 C3orf36Q3SXR2 165 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 GCSAMQ8N6F7 178 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 TOLLIPQ9H0E2 274 aa20.3■□□□□ 0.84
TMEM260-207ENST00000555497 CARHSP1Q9Y2V2 147 aaKnown RBP20.3■□□□□ 0.84
TMEM260-207ENST00000555497 IGHV3OR15-7A0A075B7D8 119 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 TDGF1P3P51864 188 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 FOXC1Q12948 553 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 DOLPP1Q86YN1 238 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 LINC00518Q8N0U6 118 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 ZNF808Q8N4W9 903 aaPredicted RBP20.29■□□□□ 0.84
TMEM260-207ENST00000555497 PLCE1Q9P212 2302 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 PIEZO2Q9H5I5 2752 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 IGHV3-43A0A0B4J1X8 118 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 H3BP45 60 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 SPRY3O43610 288 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 IGHV3-43DP0DP04 118 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 ATP6V0CP27449 155 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 MIDNQ504T8 468 aa20.29■□□□□ 0.84
TMEM260-207ENST00000555497 TMEM182Q6ZP80 229 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms