RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 PRDX2P32119 198 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 NKX2-1P43699 371 aaPredicted RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 SULT1A2P50226 295 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 TMEM33P57088 247 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 KLF3P57682 345 aaPredicted RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 SELENOVP59797 346 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 NHLH1Q02575 133 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM27E3Q08E93 113 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 EIF4EBP1Q13541 118 aaPredicted RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 GNMTQ14749 295 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF826PQ6ZT77 177 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 CCDC28AQ8IWP9 274 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 CISD2Q8N5K1 135 aaKnown RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 SLC35G3Q8N808 338 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 RELL2Q8NC24 303 aaPredicted RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 LYPD6BQ8NI32 183 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 PPP1R35Q8TAP8 253 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 Q8TCH9 128 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 PCNPQ8WW12 178 aaKnown RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 MARC2Q969Z3 335 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 GALMQ96C23 342 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 COQ2Q96H96 371 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 SMIM8Q96KF7 97 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 CXorf58Q96LI9 332 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 MSL2Q9HCI7 577 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 IL19Q9UHD0 177 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 NUP50Q9UKX7 468 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 ZDHHC8Q9ULC8 765 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 GAB2Q9UQC2 676 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 SESN1Q9Y6P5 492 aa5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 RAI1Q7Z5J4 1906 aaPredicted RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 ZFHX2Q9C0A1 2572 aaPredicted RBP5.03□□□□□ -1.6
VIPAS39-204ENST00000553576 PCNX1Q96RV3 2341 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 PLCE1Q9P212 2302 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 YLPM1P49750 1951 aaKnown RBP5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 A6NLC8 198 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 RNF212BA8MTL3 300 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 C12orf77C9JDV5 145 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 C15orf65H3BRN8 121 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 TEX46H3BTG2 121 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 K7N7A8 449 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 M0R1B8 84 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 HSD17B6O14756 317 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 WNT9BO14905 357 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 CD55P08174 381 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 SEC11BP0C7V7 166 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 CGB3P0DN86 165 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 CGB7P0DN87 165 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 PVALBP20472 110 aaPredicted RBP5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 CEACAM6P40199 344 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 OR3A1P47881 315 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 ZNF83P51522 516 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 S100A10P60903 97 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 BLOC1S1P78537 153 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 COL10A1Q03692 680 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 RBPJQ06330 500 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 ZNF585BQ52M93 769 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 PRAMEF6Q5VXH4 476 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 RPL7L1Q6DKI1 246 aaKnown RBP5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 TMEM108Q6UXF1 575 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 GFRALQ6UXV0 394 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 C22orf34Q6ZV56 151 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 LRP11Q86VZ4 500 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 OR2C3Q8N628 320 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 GCSAMQ8N6F7 178 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 CD177Q8N6Q3 437 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 ZNF645Q8N7E2 425 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 OR2Z1Q8NG97 314 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 LRRC29Q8WV35 223 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 GPR146Q96CH1 333 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 SNRNP40Q96DI7 357 aaKnown RBP5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 VKORC1Q9BQB6 163 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 GINS3Q9BRX5 216 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 SLC25A31Q9H0C2 315 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 PLEKHF2Q9H8W4 249 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 COA4Q9NYJ1 87 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 OR1A1Q9P1Q5 309 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 OR14J1Q9UGF5 321 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 FZR1Q9UM11 496 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 RCL1Q9Y2P8 373 aaKnown RBP5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 RNF115Q9Y4L5 304 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 LSM5Q9Y4Y9 91 aaKnown RBP5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 ARFGEF3Q5TH69 2177 aa5.02□□□□□ -1.61
VIPAS39-204ENST00000553576 SPENQ96T58 3664 aaKnown RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 PRRC2CQ9Y520 2896 aaKnown RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 IGKV1D-17A0A075B6S4 117 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 BORCS7-ASMTA0A0B4J1R7 106 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 ZSCAN5BA6NJL1 495 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 FAM90A26D6RGX4 464 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 F2RL2O00254 374 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 MGST3O14880 152 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 HSPA12AO43301 675 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 ADAM20O43506 726 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 YPEL1O60688 119 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 IGKV1-39P01597 117 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 HBZP02008 142 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 IGKV1D-39P04432 117 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 SERPINE2P07093 398 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 P0C879 139 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 SPP1P10451 314 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms