RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 NRASP01111 189 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MBP02144 154 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CRYGSP22914 178 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MDH2P40926 338 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 RBM11P57052 281 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 LINC00310P59036 64 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ERVFC1-1P60608 527 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PNRC1Q12796 327 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 BSXQ3C1V8 233 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ACTL10Q5JWF8 245 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 DMRTA1Q5VZB9 504 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 FAM53AQ6NSI3 398 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 GBGT1Q8N5D6 347 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF525Q8N782 197 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ZIC4Q8N9L1 334 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF114Q8NC26 417 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 DERL1Q9BUN8 251 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MAP1LC3BQ9GZQ8 125 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 HIPK2Q9H2X6 1198 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PARLQ9H300 379 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PRO3102Q9H379 93 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 SLC25A22Q9H936 323 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 VAX2Q9UIW0 290 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MED12LQ86YW9 2145 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CLEC18AA5D8T8 446 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 TMEM210A6NLX4 147 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 F2Z2F3 143 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 M0R143 59 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 RBMXL2O75526 392 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PGLYRP1O75594 196 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 GCGP01275 180 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 VDAC1P21796 283 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 UCP1P25874 307 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 EPHA8P29322 1005 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CDKN1AP38936 164 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PCP4P48539 62 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 RAB4BP61018 213 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 HIST1H3AP68431 136 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MRPS11P82912 194 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 EIF3IQ13347 325 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 SHBQ15464 509 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 BATFQ16520 125 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 TMEM241Q24JQ0 296 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CEACAM16Q2WEN9 425 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CST9LP1Q5W188 147 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ACSM6Q6P461 480 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ASCL4Q6XD76 172 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF705AQ6ZN79 300 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 Q6ZSR3 168 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 Q6ZVH6 145 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CCDC71LQ8N9Z2 235 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CLEC18CQ8NCF0 446 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 OR2M3Q8NG83 312 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 OR10V1Q8NGI7 309 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MAFAQ8NHW3 353 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 EXTL1Q92935 676 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 IL22RA2Q969J5 263 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF488Q96MN9 340 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 OR4C12Q96R67 309 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 FKBP11Q9NYL4 201 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 TP53TG3Q9ULZ0 132 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PRR14LQ5THK1 2151 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 KIR2DL5BA0A0G2JN68 375 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 KIR2DL5BA0A0G2JPC4 375 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 H7BYZ3 331 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 SYNGR3O43761 229 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 HPRT1P00492 218 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 IGLV2-14P01704 120 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 HBE1P02100 147 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 BCL3P20749 454 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 SUMO3P55854 103 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 IL24Q13007 206 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MALLQ13021 153 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ARSJQ5FYB0 599 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 C1orf194Q5T5A4 169 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 WDR74Q6RFH5 385 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PCSK4Q6UW60 755 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CYP2G1PQ6ZSU1 146 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 KMT5CQ86Y97 462 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 KIR2DL5AQ8N109 375 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF611Q8N823 705 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 TBX15Q96SF7 602 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 REPIN1Q9BWE0 567 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CACNG5Q9UF02 275 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 MRPS18CQ9Y3D5 142 aaKnown RBP4.13□□□□□ -1.75
LIMA1-214ENST00000552783 GOLT1BQ9Y3E0 138 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 CADP27708 2225 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 UBE2L5PA0A1B0GUS4 154 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 MRPL33O75394 65 aaKnown RBP4.12□□□□□ -1.75
LIMA1-214ENST00000552783 PDGFBP01127 241 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-214ENST00000552783 IGKV1-5P01602 117 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 IGLV3-19P01714 112 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 CRYAAP02489 173 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF32P17041 273 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 IL3RAP26951 378 aa4.12□□□□□ -1.75
LIMA1-214ENST00000552783 MEF2BQ02080 365 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-214ENST00000552783 BAXQ07812 192 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms