RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MDH2P40926 338 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 GALR1P47211 349 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 RPL29P47914 159 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 PSMB3P49720 205 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 RAB7AP51149 207 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 BLKP51451 505 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM50BP56557 158 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 PIGPP57054 158 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMPRSS3P57727 454 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 UBE2G2P60604 165 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 YPEL3P61236 119 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 RPL15P61313 204 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 GRB2P62993 217 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 CCL20P78556 96 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF92Q03936 586 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 FUT7Q11130 342 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 EXOSC7Q15024 291 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 CCL14Q16627 93 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM249Q2WGJ8 235 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 BSXQ3C1V8 233 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM41BQ5BJD5 291 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 PLPP4Q5VZY2 271 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 WDR25Q64LD2 544 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM215Q68D42 235 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 CYB5R2Q6BCY4 276 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 OR8G2PQ6IF36 304 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 LCN10Q6JVE6 187 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 FIGLAQ6QHK4 219 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 Q6ZS49 121 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 COX15Q7KZN9 410 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 LINC01551Q86U37 167 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 WDR5BQ86VZ2 330 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 OR4N5Q8IXE1 308 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 CA13Q8N1Q1 262 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 PNKDQ8N490 385 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM252Q8N6L7 170 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM217Q8N7C4 229 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 ZFP62Q8NB50 900 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SLC38A9Q8NBW4 561 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF738Q8NE65 137 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 OR5L1Q8NGL2 311 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 OR1N1Q8NGS0 311 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SPPL3Q8TCT6 385 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SCGB1C1Q8TD33 95 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SSC4DQ8WTU2 575 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 DAZLQ92904 295 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SPSB1Q96BD6 273 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 C1orf147Q96MC9 270 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 JSRP1Q96MG2 331 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 YPEL2Q96QA6 119 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TP53RKQ96S44 253 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 RNF2Q99496 336 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 GABRG3Q99928 467 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SMIM7Q9BQ49 75 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 VAMP8Q9BV40 100 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 PECRQ9BY49 303 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 PARP12Q9H0J9 701 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM222Q9H0R3 208 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 SH3BGRL3Q9H299 93 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 RIMS4Q9H426 269 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 DNAJC4Q9NNZ3 241 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM9BQ9NQ34 198 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 CBLN4Q9NTU7 201 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM106BQ9NUM4 274 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 OCIAD1Q9NX40 245 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 WSB2Q9NYS7 404 aaPredicted RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 GNG13Q9P2W3 67 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 B3GAT1Q9P2W7 334 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 RCL1Q9Y2P8 373 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 MRPS16Q9Y3D3 137 aaKnown RBP2.78□□□□□ -1.96
CCNT1-203ENST00000550457 WIPI2Q9Y4P8 454 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 TIMM9Q9Y5J7 89 aa2.78□□□□□ -1.96
CCNT1-203ENST00000550457 ANAPC1Q9H1A4 1944 aa2.78□□□□□ -1.97
CCNT1-203ENST00000550457 NUP210LQ5VU65 1888 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 A0A0U1RQV5 110 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 A6NCN8 305 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 FRG2CA6NGY1 282 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 ZNF850A8MQ14 1090 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 ZNF705FA8MVS1 300 aaPredicted RBP2.77□□□□□ -1.97
CCNT1-203ENST00000550457 NPIPA2E9PIF3 369 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 NPIPA5E9PKD4 350 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 H0YGG7 62 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 H7C1C5 153 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 J3QR06 171 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 K7EQS6 105 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 K7ERU9 68 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 SDCBPO00560 298 aaPredicted RBP2.77□□□□□ -1.97
CCNT1-203ENST00000550457 TCF21O43680 179 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 BUB3O43684 328 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 PDE6DO43924 150 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 WDR1O75083 606 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 RAD51DO75771 328 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 KLF8O95600 359 aaPredicted RBP2.77□□□□□ -1.97
CCNT1-203ENST00000550457 DIRAS3O95661 229 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 NRASP01111 189 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 KRASP01116 189 aa2.77□□□□□ -1.97
CCNT1-203ENST00000550457 PDGFBP01127 241 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms