RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ZNF845Q96IR2 970 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 PCGF1Q9BSM1 259 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 C1QTNF5Q9BXJ0 243 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 ERRFI1Q9UJM3 462 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 A0A0G2JMM0 328 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 UBE2L5PA0A1B0GUS4 154 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 A0A1W2PPB8 328 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 A0A1W2PRS3 328 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 KIR3DP1A8MWS1 328 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 H7BYZ3 331 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 CXCL13O43927 109 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 KBTBD11O94819 623 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 CTXN2P0C2S0 81 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 SLC25A6P12236 298 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 CCNOP22674 350 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 SERF2P84101 59 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 PEAR1Q5VY43 1037 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-228ENST00000548938 OR4C12Q96R67 309 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
HDAC7-228ENST00000548938 GPR35Q9HC97 309 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 IGHV5-10-1A0A0J9YXX1 117 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 SYNGR1O43759 233 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 MMP7P09237 267 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-228ENST00000548938 S100GP29377 79 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 CARD18P57730 90 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 B3GALT5-AS1P59052 145 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 PRSS8Q16651 343 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 GGNQ86UU5 652 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
HDAC7-228ENST00000548938 CCDC74BQ96LY2 380 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 ZNF488Q96MN9 340 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
HDAC7-228ENST00000548938 CD300LBA8K4G0 201 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TCAPO15273 167 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 CCL2P13500 99 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-228ENST00000548938 SSR4P51571 173 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 PCBD1P61457 104 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 HBG1P69891 147 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 HBG2P69892 147 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 ACSF3Q4G176 576 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-228ENST00000548938 SPANXN5Q5MJ07 72 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TGIF2LYQ8IUE0 185 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TMEM105Q8N8V8 129 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 OR10J5Q8NHC4 309 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 RDH5Q92781 318 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 ADGRG7Q96K78 797 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 NEU1Q99519 415 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 OR1A1Q9P1Q5 309 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TRAPPC2LH3BP13 241 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 IFNL4K9M1U5 179 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 HS3ST1O14792 307 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 SLC10A1Q14973 349 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TESK1Q15569 626 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 OR5B12Q96R08 314 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 SLC25A22Q9H936 323 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 SH2D2AQ9NP31 389 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 SLC39A9Q9NUM3 307 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 OCIAD1Q9NX40 245 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 FUT9Q9Y231 359 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 GJE1A6NN92 205 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 CBR3O75828 277 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 OR4A8P0C604 315 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 PMS2P11Q13670 270 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 GATAD1Q8WUU5 269 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 TAF15Q92804 592 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC7-228ENST00000548938 PRDM14Q9GZV8 571 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 PARLQ9H300 379 aa11.66□□□□□ -0.54
HDAC7-228ENST00000548938 GPR179Q6PRD1 2367 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 TRAV39A0A0B4J263 110 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 GCGP01275 180 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 COX6A1P12074 109 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 NUTF2P61970 127 aaKnown RBP11.65□□□□□ -0.54
HDAC7-228ENST00000548938 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-228ENST00000548938 ZDHHC23Q8IYP9 409 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
HDAC7-228ENST00000548938 IMMP1LQ96LU5 166 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 WFIKKN1Q96NZ8 548 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 PPP1R3CQ9UQK1 317 aa11.65□□□□□ -0.54
HDAC7-228ENST00000548938 LOC102723996A0A087X1L8 192 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 A0A1B0GWJ7 208 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 DNPH1O43598 174 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 HRASP01112 189 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 IGLV2-14P01704 120 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 UMODP07911 640 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 ZNF16P17020 682 aaPredicted RBP11.65□□□□□ -0.55
HDAC7-228ENST00000548938 PDLIM4P50479 330 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 BPIFB3P59826 476 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 GNB2P62879 340 aa11.65□□□□□ -0.55
HDAC7-228ENST00000548938 SLC38A11Q08AI6 406 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms