RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ZNF695Q8IW36 515 aa13.86□□□□□ -0.19
CHMP1A-204ENST00000547687 OR2Z1Q8NG97 314 aa13.86□□□□□ -0.19
CHMP1A-204ENST00000547687 ZFP57Q9NU63 452 aa13.86□□□□□ -0.19
CHMP1A-204ENST00000547687 TAAR3PQ9P1P4 343 aa13.86□□□□□ -0.19
CHMP1A-204ENST00000547687 FLNAP21333 2647 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-204ENST00000547687 ZFHX3Q15911 3703 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 ZSCAN5BA6NJL1 495 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 DEFB108AA8MXU0 73 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 WNT9BO14905 357 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 HSD17B13Q7Z5P4 300 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 OR52M1Q8NGK5 317 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 GPHA2Q96T91 129 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 PLEKHA2Q9HB19 425 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 E5RGE8 158 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 NPIPB11E5RHQ5 1161 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 PGLYRP1O75594 196 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 FGF2P09038 288 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 CEBPDP49716 269 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 WDR82Q6UXN9 313 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 SELENOHQ8IZQ5 122 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 PRR18Q8N4B5 295 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 LRRC20Q8TCA0 184 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 PLEKHF2Q9H8W4 249 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 BARX1Q9HBU1 254 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 OR2S2Q9NQN1 319 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 UFSP2Q9NUQ7 469 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 OR1A1Q9P1Q5 309 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 NSG2Q9Y328 171 aa13.85□□□□□ -0.19
CHMP1A-204ENST00000547687 MTORP42345 2549 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 A8MXK9 166 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 CDS2O95674 445 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 LMO1P25800 156 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 S100GP29377 79 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 MZT1Q08AG7 82 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 ADAM5Q6NVV9 412 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 ACP7Q6ZNF0 438 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 EIF4E3Q8N5X7 224 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 BVESQ8NE79 360 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 SUN5Q8TC36 379 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 NGBQ9NPG2 151 aa13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 MBNL3Q9NUK0 354 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-204ENST00000547687 ST8SIA3O43173 380 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 TNFSF12O43508 249 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 PSPNO60542 156 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 SELENOVP59797 346 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 EIF5AP63241 154 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 OR10V1Q8NGI7 309 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 OR4D5Q8NGN0 318 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 DNTTIP1Q9H147 329 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 UCP1P25874 307 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 HOXA4Q00056 320 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 RPL7L1Q6DKI1 246 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 TMED6Q8WW62 240 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 TAF9BQ9HBM6 251 aa13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 TMA7Q9Y2S6 64 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-204ENST00000547687 TMEM30CPA0ZSE6 113 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 H0Y980 276 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 LGALS8O00214 317 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 HSPA12AO43301 675 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 FGF16O43320 207 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 SPRY3O43610 288 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 ZP3P21754 424 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 TESK1Q15569 626 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 HMGN3Q15651 99 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 NCMAPQ5T1S8 102 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 RNF141Q8WVD5 230 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 PLPPR2Q96GM1 343 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 LINC00052Q96N35 136 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 ESRP2Q9H6T0 727 aaKnown RBP13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 USF3Q68DE3 2245 aa13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 RAI1Q7Z5J4 1906 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-204ENST00000547687 DUXBA0A1W2PPF3 345 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 F2RP25116 425 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 CD200P41217 278 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 TMEM33P57088 247 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 ADIPOQQ15848 244 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 SPRNQ5BIV9 151 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 SLC35E4Q6ICL7 350 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 OR5D13Q8NGL4 314 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 UBALD1Q8TB05 177 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 SPIN2AQ99865 258 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 SPIN2BQ9BPZ2 258 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 UBTD1Q9HAC8 227 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 KCNIP1Q9NZI2 227 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 FBXL17Q9UF56 701 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 RCL1Q9Y2P8 373 aaKnown RBP13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 POMT1Q9Y6A1 747 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 KRBOX1C9JBD0 128 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 PLAUP00749 431 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 HEXAP06865 529 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 FOSL1P15407 271 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 M6PRP20645 277 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 LOXP28300 417 aaPredicted RBP13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 CEACAM6P40199 344 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 P2RY1P47900 373 aa13.81□□□□□ -0.2
CHMP1A-204ENST00000547687 GPR157Q5UAW9 335 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms