RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 C4orf45Q96LM5 186 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 METTL7AQ9H8H3 244 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 NAT8Q9UHE5 227 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 B3GALT1Q9Y5Z6 326 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 COL4A2P08572 1712 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 IGHV1-69-2A0A0G2JMI3 117 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 PATE3B3GLJ2 98 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 GALR2O43603 387 aaPredicted RBP9.72□□□□□ -0.85
CDH4-201ENST00000543233 CST7O76096 145 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 BCL2P10415 239 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 ZNF823P16415 610 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 EWSR1Q01844 656 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDH4-201ENST00000543233 TESK1Q15569 626 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 PRAMEF5Q5TYX0 476 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 SLC18B1Q6NT16 456 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 OR4S2Q8NH73 311 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 FBXL7Q9UJT9 491 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 POLR1DQ9Y2S0 133 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 FAM166BA8MTA8 275 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 PLPP3O14495 311 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 HLA-HP01893 362 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 AZU1P20160 251 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 CKS1BP61024 79 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 COMMD2Q86X83 199 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 ASB10Q8WXI3 467 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 IMMP2LQ96T52 175 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 RBM24Q9BX46 236 aaKnown RBP9.71□□□□□ -0.85
CDH4-201ENST00000543233 SIT1Q9Y3P8 196 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 TMEM14AQ9Y6G1 99 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 WIPF3A6NGB9 483 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 ZNF878C9JN71 531 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 ONECUT2O95948 504 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 ADMP35318 185 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 KLHL24Q6TFL4 600 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 ANKRD37Q7Z713 158 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 SULF2Q8IWU5 870 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 OR13G1Q8NGZ3 307 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 SPACA5Q96QH8 159 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 PYGO2Q9BRQ0 406 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 TXNIPQ9H3M7 391 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 GPR84Q9NQS5 396 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 OCIAD1Q9NX40 245 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 RARRES3Q9UL19 164 aa9.71□□□□□ -0.85
CDH4-201ENST00000543233 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 P2RY10O00398 339 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 HAND1O96004 215 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 CRISP2P16562 243 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 IL3RAP26951 378 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 DNM1P34Q6PK57 102 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 FER1L6-AS1Q8NA97 138 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 PTX4Q96A99 478 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 CYYR1Q96J86 154 aa9.71□□□□□ -0.86
CDH4-201ENST00000543233 NXPH3O95157 252 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 CDAP32320 146 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
CDH4-201ENST00000543233 AMTP48728 403 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 RHOGP84095 191 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 TMEM267Q0VDI3 215 aaPredicted RBP9.7□□□□□ -0.86
CDH4-201ENST00000543233 LYSMD4Q5XG99 296 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 OR2M7Q8NG81 312 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 MPIG6BO95866 241 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 EMC4Q5J8M3 183 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 OR5C1Q8NGR4 320 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 OR1B1Q8NGR6 318 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 ZNF519Q8TB69 540 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 ST6GALNAC6Q969X2 333 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 THYN1Q9P016 225 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 RNF114Q9Y508 228 aa9.7□□□□□ -0.86
CDH4-201ENST00000543233 IGLV1-36A0A0B4J1U3 117 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 RBMXL2O75526 392 aaKnown RBP9.69□□□□□ -0.86
CDH4-201ENST00000543233 PPP1CBP62140 327 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 RHBDD2Q6NTF9 364 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 MAFAQ8NHW3 353 aaPredicted RBP9.69□□□□□ -0.86
CDH4-201ENST00000543233 MS4A18H0YCH9 400 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 K7ESF4 209 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 MPLP40238 635 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 RPL23P62829 140 aaKnown RBP9.69□□□□□ -0.86
CDH4-201ENST00000543233 MS4A18Q3C1V0 323 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 MPV17L2Q567V2 206 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 KCTD18Q6PI47 426 aaPredicted RBP9.69□□□□□ -0.86
CDH4-201ENST00000543233 DTWD2Q8NBA8 298 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 OR8G5Q8NG78 346 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 OR52M1Q8NGK5 317 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 TUBD1Q9UJT1 453 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 IGHV5-10-1A0A0J9YXX1 117 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 C9orf172C9J069 976 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 MT-ATP6P00846 226 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 CLDN17P56750 224 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 SRPXP78539 464 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 PSG9Q00887 426 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 RELBQ01201 579 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
CDH4-201ENST00000543233 HLA-BQ31612 363 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 TSPO2Q5TGU0 170 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
CDH4-201ENST00000543233 ASPHD2Q6ICH7 369 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms