RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 TOLLIPQ9H0E2 274 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 MRPS18AQ9NVS2 196 aaKnown RBP11.93□□□□□ -0.5
RTN3-211ENST00000542238 RYR2Q92736 4967 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 A0A1W2PN81 502 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 TRIM64CA6NLI5 447 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 LDLRAD4O15165 306 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 RGS11O94810 467 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 BAG2O95816 211 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
RTN3-211ENST00000542238 CHRNA7P36544 502 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 ADARB1P78563 741 aaKnown RBP11.92□□□□□ -0.5
RTN3-211ENST00000542238 PITPNAQ00169 270 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
RTN3-211ENST00000542238 XAF1Q6GPH4 301 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 GLIPR1L1Q6UWM5 242 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 ZNF554Q86TJ5 538 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 TCTEX1D1Q8N7M0 179 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 NPBQ8NG41 125 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 MUL1Q969V5 352 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 ORAI1Q96D31 301 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
RTN3-211ENST00000542238 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
RTN3-211ENST00000542238 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
RTN3-211ENST00000542238 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 GLAP06280 429 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 IGFBP3P17936 291 aaPredicted RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 FUT3P21217 361 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 PPP1CCP36873 323 aaKnown RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 TMEM267Q0VDI3 215 aaPredicted RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 GNMTQ14749 295 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 ZNF660Q6AZW8 331 aaPredicted RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 JAGN1Q8N5M9 183 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 ISOC1Q96CN7 298 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 FLYWCH2Q96CP2 140 aaKnown RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 SMIM19Q96E16 107 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 TM2D3Q9BRN9 247 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 ELOVL1Q9BW60 279 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 SELENOIQ9C0D9 397 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 FGF20Q9NP95 211 aaPredicted RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 RNF150Q9ULK6 438 aa11.91□□□□□ -0.5
RTN3-211ENST00000542238 DYNC2H1Q8NCM8 4307 aaKnown RBP11.91□□□□□ -0.5
RTN3-211ENST00000542238 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 A0A087WW49 117 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 UBE2QL1A1L167 161 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
RTN3-211ENST00000542238 OGG1O15527 345 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 YPEL1O60688 119 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 GPX5O75715 221 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 SC5DO75845 299 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 NDUFA3O95167 84 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 DCKP27707 260 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 CD40LGP29965 261 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 ETV1P50549 477 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 HTD2P86397 168 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 PLGLAQ15195 96 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 Q499Y3 187 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 OR2G6Q5TZ20 316 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 AWAT2Q6E213 333 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 PYHIN1Q6K0P9 492 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 ODF3L1Q8IXM7 274 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 OR2AK2Q8NG84 335 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 OR13C5Q8NGS8 318 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 GALMQ96C23 342 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 BANF2Q9H503 90 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 MBNL3Q9NUK0 354 aaKnown RBP11.9□□□□□ -0.5
RTN3-211ENST00000542238 BABAM2Q9NXR7 383 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
RTN3-211ENST00000542238 SAA2-SAA4A0A096LPE2 208 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 TRBV5-5A0A0J9YX44 114 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 LOC100130705A0A1B0GUX0 176 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 SOX15O60248 233 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
RTN3-211ENST00000542238 MAS1P04201 325 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
RTN3-211ENST00000542238 SAA2P0DJI9 122 aaPredicted RBP11.89□□□□□ -0.51
RTN3-211ENST00000542238 IGHV4-30-4P0DP06 118 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 MGMTP16455 207 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 OR3A3P47888 321 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
RTN3-211ENST00000542238 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 LY6G6FQ5SQ64 297 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 LYPD6Q86Y78 171 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 CASTOR1Q8WTX7 329 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 GHSRQ92847 366 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 SLC29A1Q99808 456 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 SMPD3Q9NY59 655 aaPredicted RBP11.89□□□□□ -0.51
RTN3-211ENST00000542238 STUB1Q9UNE7 303 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 FBXO7Q9Y3I1 522 aa11.89□□□□□ -0.51
RTN3-211ENST00000542238 HUWE1Q7Z6Z7 4374 aaKnown RBP11.89□□□□□ -0.51
RTN3-211ENST00000542238 TRAV8-7A0A075B6U6 113 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 IRGMA1A4Y4 181 aa11.88□□□□□ -0.51
RTN3-211ENST00000542238 RRHO14718 337 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms