RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 FAAP20Q6NZ36 180 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 ODF3L1Q8IXM7 274 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 OR52L2PQ8NGH6 319 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 OR4P4Q8NGL7 312 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 OR5H2Q8NGV7 314 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 RFESDQ8TAC1 157 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 ZFAND2BQ8WV99 257 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 ST6GALNAC6Q969X2 333 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 MOB3AQ96BX8 217 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 SLC6A7Q99884 636 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF251Q9BRH9 671 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 LPAR2Q9HBW0 351 aa8.59□□□□□ -1.03
VPS33A-204ENST00000540669 FN1P02751 2386 aaKnown RBP8.59□□□□□ -1.03
VPS33A-204ENST00000540669 IGKV1D-13A0A0B4J2D9 117 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 LY6LH3BQJ8 138 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 SDCBPO00560 298 aaPredicted RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 SLC31A2O15432 143 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 PROP1O75360 226 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 RAB3DO95716 219 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 PPYP01298 95 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 IGKV1-13P0DP09 117 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 ZBTB25P24278 435 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 SLC6A1P30531 599 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 PPP1CCP36873 323 aaKnown RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 RFX2P48378 723 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 UCP3P55916 312 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 DLX1P56177 255 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 ARF6P62330 175 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 DCTN2Q13561 401 aaKnown RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 CHRFAM7AQ494W8 412 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 PLA1AQ53H76 456 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 CT45A1Q5HYN5 189 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 DCAF12L2Q5VW00 463 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 NCR3LG1Q68D85 454 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 BTNL3Q6UXE8 466 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 Q71RC1 249 aaPredicted RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 TOMM5Q8N4H5 51 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 OR56B4Q8NH76 319 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 CT45A3Q8NHU0 189 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 C11orf54Q9H0W9 315 aaPredicted RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 TMEM160Q9NX00 188 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 RDH8Q9NYR8 311 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 EHFQ9NZC4 300 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 ONECUT1Q9UBC0 465 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 CDC42EP3Q9UKI2 254 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 PSG11Q9UQ72 335 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 GAB2Q9UQC2 676 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 OR2W1Q9Y3N9 320 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
VPS33A-204ENST00000540669 HIVEP2P31629 2446 aa8.58□□□□□ -1.04
VPS33A-204ENST00000540669 ZFHX3Q15911 3703 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 IGHV3-43A0A0B4J1X8 118 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 hCG_1809904A0A1W2PP81 198 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 A0A1W2PPE2 198 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 A0A1W2PR64 198 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 A0A1W2PRV1 198 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 NAP1L6A6NFF2 107 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 OR5H14A6NHG9 310 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 TGFAP01135 160 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 IFNA2P01563 188 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 PMP2P02689 132 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 FCER2P06734 321 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 IGHV3-43DP0DP04 118 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 AADACP22760 399 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 UBE2E1P51965 193 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 ARPC4P59998 168 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 HABP2Q14520 560 aaPredicted RBP8.57□□□□□ -1.04
VPS33A-204ENST00000540669 SURF2Q15527 256 aaPredicted RBP8.57□□□□□ -1.04
VPS33A-204ENST00000540669 HLA-DRB5Q30154 266 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 METTL11BQ5VVY1 283 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 FAM71F2Q6NXP2 309 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF782Q6ZMW2 699 aaPredicted RBP8.57□□□□□ -1.04
VPS33A-204ENST00000540669 OR9G1Q8NH87 305 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 OR10J5Q8NHC4 309 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 SMR3AQ99954 134 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 ABHD14AQ9BUJ0 271 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 CLEC7AQ9BXN2 247 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 OR2S2Q9NQN1 319 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 SIRT7Q9NRC8 400 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 ABCB10Q9NRK6 738 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 SLC23A1Q9UHI7 598 aa8.57□□□□□ -1.04
VPS33A-204ENST00000540669 NF1P21359 2839 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 CENPVL3A0A0U1RRI6 287 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 J3QR06 171 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 BET1O15155 118 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 LYRM1O43325 122 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 TOX4O94842 621 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 AMY2AP04746 511 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 NFYAP23511 347 aaPredicted RBP8.56□□□□□ -1.04
VPS33A-204ENST00000540669 FCGR2CP31995 323 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRR20EP86478 221 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRR20CP86479 221 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRR20DP86480 221 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRR20BP86481 221 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRR20AP86496 221 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms