RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CHD3Q12873 2000 aaKnown RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 TRAV25A0A0B4J276 109 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 MUC21A0A0G2JKD1 596 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 MUC21A0A140T8X8 626 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 A0A1B0GW15 77 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 A0A1W2PS18 150 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 FOXI3A8MTJ6 420 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 NDUFS4O43181 175 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 TLX3O43711 291 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 SRSF10O75494 262 aaKnown RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 MPZL1O95297 269 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 RENP00797 406 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 MT-ATP6P00846 226 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 RHOCP08134 193 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 OR5AL1P0C617 328 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 PNMTP11086 282 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 IGLL1P15814 213 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF17P17021 662 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 PTGER1P34995 402 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF133P52736 654 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 UBE2G1P62253 170 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ID3Q02535 119 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 POU3F1Q03052 451 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 KLRD1Q13241 179 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 KLF5Q13887 457 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 PRICKLE4Q2TBC4 344 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 FAM78AQ5JUQ0 283 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 MUC21Q5SSG8 566 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 DCAF12Q5T6F0 453 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 LCN10Q6JVE6 187 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 SLC48A1Q6P1K1 146 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ABHD17CQ6PCB6 329 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 METTL27Q8N6F8 245 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 DCAF4L2Q8NA75 395 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 LRRC75AQ8NAA5 344 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 NUP43Q8NFH3 380 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 OR51E1Q8TCB6 317 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 SCGB1C1Q8TD33 95 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 WIPF2Q8TF74 440 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 KLK6Q92876 244 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF689Q96CS4 500 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 CHRDL1Q9BU40 450 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 SPON2Q9BUD6 331 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 TMEM191AQ9H0A3 160 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 GNB4Q9HAV0 340 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 HES4Q9HCC6 221 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 KCNIP2Q9NS61 270 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 RPRMQ9NS64 109 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 TAS2R4Q9NYW5 299 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 KLHL13Q9P2N7 655 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 TBC1D29Q9UFV1 150 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 PLAGL1Q9UM63 463 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-211ENST00000539921 RFNGQ9Y644 331 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 R4GMQ9 66 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 ARL2-SNX15V9GYD0 113 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 PLXNA2O75051 1894 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 DENND4CQ5VZ89 1909 aa5.25□□□□□ -1.57
SNHG1-211ENST00000539921 TRAV34A0A0B4J273 112 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 A0A1B0GWA3 101 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 A0A1W2PPM0 123 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 FAM231BA6NCW3 169 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 PGPEP1LA6NFU8 196 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 C9JCJ5 164 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 SDCBPO00560 298 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 BRI3O95415 125 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 C1orf105O95561 183 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 TMEM50AO95807 157 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 TIMP1P01033 207 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 ADH4P08319 380 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 FABP2P12104 132 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 PGCP20142 388 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 RPS12P25398 132 aaKnown RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 GPR183P32249 361 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 SNU13P55769 128 aaKnown RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 GFRA1P56159 465 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 LGALS4P56470 323 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 RHOAP61586 193 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 YPEL5P62699 121 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 GRB2P62993 217 aaKnown RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 HBG1P69891 147 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 HBG2P69892 147 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 PLAURQ03405 335 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 NFATC4Q14934 902 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 OR8B8Q15620 311 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 LRRC75BQ2VPJ9 315 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 GCSAMLQ5JQS6 135 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 FAM182BQ5T319 152 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 MRPL2Q5T653 305 aaKnown RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 HLA-DQA1Q5Y7H0 255 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 Q6ZVH6 145 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 OLIG3Q7RTU3 272 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 DEFB132Q7Z7B7 95 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 OR9G4Q8NGQ1 327 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 OR10AG1Q8NH19 301 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 OR4C3Q8NH37 302 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 OR4A16Q8NH70 328 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF502Q8TBZ5 544 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 BLNKQ8WV28 456 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 RTN4IP1Q8WWV3 396 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms