RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MADCAM1Q13477 382 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 IL18Q14116 193 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 KIR3DL3Q8N743 410 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 OR13A1Q8NGR1 328 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 ZNF436Q9C0F3 470 aaPredicted RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 SRRQ9GZT4 340 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 KPTNQ9Y664 436 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 ZNF469Q96JG9 3925 aaPredicted RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 TRAV39A0A0B4J263 110 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 FABP12A6NFH5 140 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 M0R1W7 72 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 CD5LO43866 347 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 DTYMKP23919 212 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 PAX8Q06710 450 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 CR1LQ2VPA4 569 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 FAHD2BQ6P2I3 314 aaPredicted RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 STPG2Q8N412 459 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 FAHD2AQ96GK7 314 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 ALX4Q9H161 411 aaPredicted RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 MBNL3Q9NUK0 354 aaKnown RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 OPN4Q9UHM6 478 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 KCNS2Q9ULS6 477 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 ACANP16112 2415 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 CSPG4Q6UVK1 2322 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 J3QLI3 93 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 PTHLHP12272 177 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 CCL3L1P16619 93 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 RCC1P18754 421 aaPredicted RBP12.69□□□□□ -0.38
DDB1-216ENST00000539739 EXOSC2Q13868 293 aaKnown RBP12.69□□□□□ -0.38
DDB1-216ENST00000539739 TATDN3Q17R31 274 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 TUSC1Q2TAM9 212 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 RNF212Q495C1 297 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 ZNF880Q6PDB4 577 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 FAM131AQ6UXB0 335 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 TCF23Q7RTU1 214 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 ARL11Q969Q4 196 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 C7orf69Q9H7B7 122 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
DDB1-216ENST00000539739 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 SULT1C2O00338 296 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 SPINT2O43291 252 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 NDUFS6O75380 124 aaKnown RBP12.68□□□□□ -0.38
DDB1-216ENST00000539739 RBP4P02753 201 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 FCGR3AP08637 254 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 LINC00052Q96N35 136 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 MARVELD1Q9BSK0 173 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 Q9N2K0 584 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
DDB1-216ENST00000539739 C17orf98A8MV24 154 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 TOX4O94842 621 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 FGF2P09038 288 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 CGB3P0DN86 165 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 CGB7P0DN87 165 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 MRPS10P82664 201 aaKnown RBP12.67□□□□□ -0.38
DDB1-216ENST00000539739 SRSF7Q16629 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDB1-216ENST00000539739 CREB3L1Q96BA8 519 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 ABHD1Q96SE0 405 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 OCSTAMPQ9BR26 566 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 ST6GALNAC5Q9BVH7 336 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 METTL8Q9H825 291 aaKnown RBP12.67□□□□□ -0.38
DDB1-216ENST00000539739 TAF9BQ9HBM6 251 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 ZNF286AQ9HBT8 521 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 ZNF230Q9UIE0 474 aaPredicted RBP12.67□□□□□ -0.38
DDB1-216ENST00000539739 DSCAML1Q8TD84 2053 aa12.67□□□□□ -0.38
DDB1-216ENST00000539739 C12orf77C9JDV5 145 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 LPLP06858 475 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 SSTR5P35346 364 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 KIR2DS4P43632 304 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 DLX6P56179 175 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 ERVFRD-1P60508 538 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 C17orf58Q2M2W7 97 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 HEPN1Q6WQI6 88 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 PRR18Q8N4B5 295 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 DMBX1Q8NFW5 382 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 RNASE11Q8TAA1 199 aaKnown RBP12.66□□□□□ -0.38
DDB1-216ENST00000539739 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 SFT2D1Q8WV19 159 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
DDB1-216ENST00000539739 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 PCGF1Q9BSM1 259 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 V9GYH0 126 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 A0A0B4J293 547 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 TRDCB7Z8K6 153 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 NPIPB11E5RHQ5 1161 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 HBZP02008 142 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 PRTN3P24158 256 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 KRTAP1-1Q07627 177 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 HMGN3Q15651 99 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 OR52W1Q6IF63 320 aa12.66□□□□□ -0.38
DDB1-216ENST00000539739 Q6ZS49 121 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms