RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 FCGR2AP12318 317 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 KLK2P20151 261 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 FUT3P21217 361 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 CNN1P51911 297 aaKnown RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 UBE2NP61088 152 aaKnown RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 RPL15P61313 204 aaKnown RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 COL10A1Q03692 680 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 PLCXD2Q0VAA5 305 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 RIPPLY2Q5TAB7 128 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 TMEM211Q6ICI0 200 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 DGAT2L6Q6ZPD8 337 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 CYP2G1PQ6ZSU1 146 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 PRSS41Q7RTY9 318 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 LYZL2Q7Z4W2 148 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 C17orf82Q86X59 251 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 KIR2DL5AQ8N109 375 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 DEFB119Q8N690 84 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 TMEM252Q8N6L7 170 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 OR5C1Q8NGR4 320 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 LMX1AQ8TE12 382 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 SLC37A2Q8TED4 501 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 NPRL2Q8WTW4 380 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 MOB3AQ96BX8 217 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 GMPPAQ96IJ6 420 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 FAM71F1Q96KD3 344 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 FOXN4Q96NZ1 517 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 MS4A10Q96PG2 267 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 TECTBQ96PL2 329 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 NKX3-1Q99801 234 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 SMIM7Q9BQ49 75 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 C20orf144Q9BQM9 153 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 TMEM208Q9BTX3 173 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 ABHD14AQ9BUJ0 271 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 SNHG12Q9BXW3 62 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 PARD6GQ9BYG4 376 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 OPN3Q9H1Y3 402 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 ASCL3Q9NQ33 180 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 ALKBH4Q9NXW9 302 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 MRPS2Q9Y399 296 aaKnown RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 C20orf202A1L168 122 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CLEC18AA5D8T8 446 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ANKUB1A6NFN9 424 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 FAM24AA6NFZ4 105 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ZFP92A6NM28 416 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 FOXI3A8MTJ6 420 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 CEBPZOSA8MTT3 80 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 B4DGG1 531 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 TOX3O15405 576 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 SSSCA1O60232 199 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 DHRS3O75911 302 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 KBTBD11O94819 623 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 PFN1P07737 140 aaKnown RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 VDAC1P21796 283 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 BMP5P22003 454 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 TUBG1P23258 451 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 UCP1P25874 307 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CD82P27701 267 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 NBL1P41271 181 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CAPZBP47756 277 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 DYNLT3P51808 116 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 EFNA3P52797 238 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 SLC37A1P57057 533 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 FBXW4P57775 412 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ZNF121P58317 390 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 CCL20P78556 96 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 POU3F1Q03052 451 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 C17orf67Q0P5P2 114 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ADIRFQ15847 76 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 SRSF7Q16629 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
USP28-202ENST00000535607 PRTGQ2VWP7 1150 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 HLA-BQ31612 363 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 NKAIN1Q4KMZ8 207 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 TMEM41BQ5BJD5 291 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ACTL10Q5JWF8 245 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 ZNF774Q6NX45 483 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 MEX3BQ6ZN04 569 aaKnown RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 P4HA3Q7Z4N8 544 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 GBGT1Q8N5D6 347 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CLEC18CQ8NCF0 446 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 OR52M1Q8NGK5 317 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 OR5L1Q8NGL2 311 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CCL4L1Q8NHW4 92 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 NEK7Q8TDX7 302 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 DTD1Q8TEA8 209 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 SAP25Q8TEE9 199 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CA5BP1Q8WTZ4 195 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 NAT6Q93015 286 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 SPTSSAQ969W0 71 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 MSI2Q96DH6 328 aaKnown RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 MMABQ96EY8 250 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 C1orf147Q96MC9 270 aaPredicted RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 TMEM56Q96MV1 263 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 VN1R1Q9GZP7 353 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 TMEM222Q9H0R3 208 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 MAGT1Q9H0U3 335 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 NCOR1P1Q9H4R4 102 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 CALHM2Q9HA72 323 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ZNF160Q9HCG1 818 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms