RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 UBALD2Q8IYN6 164 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 CA13Q8N1Q1 262 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 VWCEQ96DN2 955 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 CCDC3Q9BQI4 270 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 GNB4Q9HAV0 340 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 PLEKHJ1Q9NW61 149 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 IL36BQ9NZH7 164 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 MYO7BQ6PIF6 2116 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 TRAV34A0A0B4J273 112 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 TRAPPC2LH3BP13 241 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 LGALS4P56470 323 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 PSG9Q00887 426 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 ZNF77Q15935 545 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 TBR1Q16650 682 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 HLA-DRB5Q30154 266 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 C12orf54Q6X4T0 127 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 MEX3BQ6ZN04 569 aaKnown RBP6.94□□□□□ -1.3
CSDE1-214ENST00000530886 C1QL2Q7Z5L3 287 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 SUMF1Q8NBK3 374 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 OR5D13Q8NGL4 314 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 SLC25A40Q8TBP6 338 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 KCNK17Q96T54 332 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 GPER1Q99527 375 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 TXNDC17Q9BRA2 123 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 LAMA1P25391 3075 aa6.94□□□□□ -1.3
CSDE1-214ENST00000530886 OR2T8A6NH00 312 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 C11orf98E9PRG8 122 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 F2Z2F3 143 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 CA2P00918 260 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 REG1BP48304 166 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 ZNF83P51522 516 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 IGLV3-21P80748 117 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 IGFBP7Q16270 282 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 Q6ZS49 121 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 LINC00346Q8IVM7 164 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 UEVLDQ8IX04 471 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 OR10P1Q8NGE3 313 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 SARAFQ96BY9 339 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 ATP6V0BQ99437 205 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 RTN4RQ9BZR6 473 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 ST20Q9HBF5 79 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 GP6Q9HCN6 339 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 TMEM38BQ9NVV0 291 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 KLHL13Q9P2N7 655 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 COLQQ9Y215 455 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 ODAMA1E959 279 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 GALR2O43603 387 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 SAP30O75446 220 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 IGKV1D-33P01593 117 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 IGKV1-33P01594 117 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 C1QTNF9P0C862 333 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 CBLN1P23435 193 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 AMTP48728 403 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 GFRA1P56159 465 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 HBG1P69891 147 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 HBG2P69892 147 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 PSG4Q00888 419 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 C10orf35Q96D05 121 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 HDHD3Q9BSH5 251 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 KCNIP2Q9NS61 270 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 MMP17Q9ULZ9 603 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 LHFPL6Q9Y693 200 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 TIMP3P35625 211 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 SCCPDHQ8NBX0 429 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 OR2M3Q8NG83 312 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 OR8B12Q8NGG6 310 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 OR1K1Q8NGR3 316 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 GUCD1Q96NT3 240 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 MBNL1Q9NR56 388 aaKnown RBP6.93□□□□□ -1.3
CSDE1-214ENST00000530886 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 COL6A3P12111 3177 aa6.93□□□□□ -1.3
CSDE1-214ENST00000530886 MDFIC2A0A1B0GVS7 189 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 A0A1W2PRU2 124 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 FXYD4P59646 89 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 DCAF12Q5T6F0 453 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 KIAA0895LQ68EN5 471 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 LHX8Q68G74 356 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 MRPL54Q6P161 138 aaKnown RBP6.92□□□□□ -1.3
CSDE1-214ENST00000530886 LILRA6Q6PI73 481 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 ABHD12BQ7Z5M8 362 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-214ENST00000530886 HAPLN4Q86UW8 402 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 TMEFF1Q8IYR6 380 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 TAF15Q92804 592 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSDE1-214ENST00000530886 ADIPOR1Q96A54 375 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 CENPMQ9NSP4 180 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 PLA2G3Q9NZ20 509 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 UBE2J1Q9Y385 318 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-214ENST00000530886 HEBP2Q9Y5Z4 205 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 C22orf46C9J442 243 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 EML2O95834 649 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 PPYP01298 95 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 EN2P19622 333 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-214ENST00000530886 HERV-K104P61576 105 aa6.92□□□□□ -1.3
CSDE1-214ENST00000530886 ELAVL3Q14576 367 aaKnown RBP6.92□□□□□ -1.3
CSDE1-214ENST00000530886 LY6G5CQ5SRR4 150 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms