RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 WIPI2Q9Y4P8 454 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 TMEM56-RWDD3S4R434 201 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 LINC00862A6NCI5 91 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 SEC11BP0C7V7 166 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 TOMM7Q9P0U1 55 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 CDKN2AP42771 156 aaKnown RBP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 SFTA2Q6UW10 78 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 OVCH2Q7RTZ1 564 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 TNFRSF12AQ9NP84 129 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 AGFG2O95081 481 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 XAF1Q6GPH4 301 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 KCNS1Q96KK3 526 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 WNT10AQ9GZT5 417 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 RBMY1BA6NDE4 496 aaKnown RBP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 RBMY1EA6NEQ0 496 aaKnown RBP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 LINC01387J3KSC0 135 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 RBMY1DP0C7P1 496 aaKnown RBP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
LRRK1-202ENST00000525284 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 ZG16BQ96DA0 208 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
LRRK1-202ENST00000525284 SCAND1P57086 179 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 WNT2BQ93097 391 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 TTC9CQ8N5M4 171 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 SRSF4Q08170 494 aaKnown RBP11.96□□□□□ -0.49
LRRK1-202ENST00000525284 PIGYQ3MUY2 71 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 LURAP1LQ8IV03 231 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 ZDHHC8Q9ULC8 765 aa11.96□□□□□ -0.49
LRRK1-202ENST00000525284 RRHO14718 337 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 SPNS2Q8IVW8 549 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 RAX2Q96IS3 184 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 NRIP2Q9BQI9 281 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 KCNE5Q9UJ90 142 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 TINAGQ9UJW2 476 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 FAM53BQ14153 422 aa11.96□□□□□ -0.5
LRRK1-202ENST00000525284 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.5
LRRK1-202ENST00000525284 TP53I13Q8NBR0 393 aaPredicted RBP11.96□□□□□ -0.5
LRRK1-202ENST00000525284 A0A1B0GUL6 1792 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 MYOGP15173 224 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 A0A0A6YYD5 115 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 ASB5Q8WWX0 329 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 GPX1P07203 203 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 PF4V1P10720 104 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 GZMHP20718 246 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 GALP22466 123 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 PHLDA1Q8WV24 401 aaPredicted RBP11.95□□□□□ -0.5
LRRK1-202ENST00000525284 ZNF576Q9H609 170 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 NPVFQ9HCQ7 196 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 DMRT1Q9Y5R6 373 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 LINC00869P0C866 280 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 TMEM45BQ96B21 275 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 ZNF414Q96IQ9 312 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 GABRG2P18507 467 aa11.95□□□□□ -0.5
LRRK1-202ENST00000525284 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
LRRK1-202ENST00000525284 KLF4O43474 513 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 HCP5Q6MZN7 132 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 CITED1Q99966 193 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 RNF7Q9UBF6 113 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 EDIL3O43854 480 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 EML2O95834 649 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 COX11Q9Y6N1 276 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 LINC00614P0C842 121 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 AICDAQ9GZX7 198 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 HILPDAQ9Y5L2 63 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 LIPFP07098 398 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 CTLA4P16410 223 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 RAC3P60763 192 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 ASCL5Q7RTU5 278 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 VSTM2LQ96N03 204 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 TJP1Q07157 1748 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 H3BTX0 84 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 OR6X1Q8NH79 312 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 NT5CQ8TCD5 201 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 CRYGNQ8WXF5 182 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 TOX2Q96NM4 488 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 OPN3Q9H1Y3 402 aaPredicted RBP11.94□□□□□ -0.5
LRRK1-202ENST00000525284 RNF122Q9H9V4 155 aa11.94□□□□□ -0.5
LRRK1-202ENST00000525284 A0A1W2PS18 150 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 WNT9BO14905 357 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 DPTQ07507 201 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 DEGS2Q6QHC5 323 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 ASCL4Q6XD76 172 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 PGLYRP3Q96LB9 341 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 VCX2Q9H322 139 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 DNAJC4Q9NNZ3 241 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 A0A1W2PQM1 296 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 C17orf51A8MQB3 221 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms