RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CCL17Q92583 94 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 GTF2H4Q92759 462 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 ITFG2Q969R8 447 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMEM159Q96B96 161 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 OPTNQ96CV9 577 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM210AQ96ND0 272 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 BIRC8Q96P09 236 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR52B2Q96RD2 323 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 HBEGFQ99075 208 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 VAT1Q99536 393 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 GPR22Q99680 433 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 DOK1Q99704 481 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 COPS4Q9BT78 406 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 NXF2Q9GZY0 626 aaKnown RBP1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 MFSD1Q9H3U5 465 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 UBAP1Q9NZ09 502 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMEM216Q9P0N5 145 aa1.93□□□□□ -2.1
HMGN1P28-201ENST00000521340 GPR179Q6PRD1 2367 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TCRBV3S1A0A5B6 114 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 FXYD1O00168 92 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 HCRTO43612 131 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 GATBO75879 557 aaKnown RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CYB5R3P00387 301 aaPredicted RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR4Q2P0C623 313 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CD28P10747 220 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 PSMB6P28072 239 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TSPOP30536 169 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 PMELP40967 661 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 RPL5P46777 297 aaKnown RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 ERFP50548 548 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TAS2R43P59537 309 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TSPAN5P62079 268 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 ADIGQ0VDE8 80 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF404Q494X3 552 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 LCN8Q6JVE9 175 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM45BPQ6NSW5 357 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF880Q6PDB4 577 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CLEC19AQ6UXS0 136 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CYHR1Q6ZMK1 362 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 AHSA2Q719I0 299 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 ORMDL3Q8N138 153 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF567Q8N184 647 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMEM105Q8N8V8 129 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 C12orf29Q8N999 325 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 SYNPRQ8TBG9 265 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM45AQ8TCE6 357 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 DOK4Q8TEW6 326 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 PDCD6IPQ8WUM4 868 aaKnown RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 LZICQ8WZA0 190 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CMTM5Q96DZ9 223 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 SMIM8Q96KF7 97 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CATSPER2Q96P56 530 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 IP6K3Q96PC2 410 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 SERPINI1Q99574 410 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 SDHCQ99643 169 aaPredicted RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TBL1YQ9BQ87 522 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 DRC3Q9H069 523 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 Q9H521 79 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 POMKQ9H5K3 350 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 DHX35Q9H5Z1 703 aaKnown RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 IFT46Q9NQC8 304 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 NLE1Q9NVX2 485 aaPredicted RBP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 RBM22Q9NW64 420 aaKnown RBP eCLIP1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 TAS2R5Q9NYW4 299 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 RNF11Q9Y3C5 154 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 HEY1Q9Y5J3 304 aa1.92□□□□□ -2.1
HMGN1P28-201ENST00000521340 COL5A1P20908 1838 aaPredicted RBP1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 FANCMQ8IYD8 2048 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 MYBPHLA2RUH7 354 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 PRORSD1PA6NEY8 169 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 TRPC5OSA6NMA1 111 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 A8MT66 165 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 BBIP1A8MTZ0 92 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 RPL36A-HNRNPH2H7BZ11 118 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 PIRO00625 290 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 TXNDC9O14530 226 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 CBR3O75828 277 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 DHRS3O75911 302 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 RCBTB2O95199 551 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF286BP0CG31 522 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZNF35P13682 527 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 HLA-GP17693 338 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 IL1RNP18510 177 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 RANBP1P43487 201 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 CDK9P50750 372 aaKnown RBP1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 RPL14P50914 215 aaKnown RBP1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 DNAJB13P59910 316 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 TPI1P60174 286 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 UBE2KP61086 200 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 PSME3P61289 254 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 STX4Q12846 297 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 MAPRE2Q15555 327 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR4D1Q15615 310 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 CEACAM21Q3KPI0 293 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 COQ5Q5HYK3 327 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 C6orf52Q5T4I8 152 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 KPRPQ5T749 579 aaPredicted RBP1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM104BQ5XKR9 115 aa1.91□□□□□ -2.1
HMGN1P28-201ENST00000521340 GLYATQ6IB77 296 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms