RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 MAGEA5P43359 124 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 KIR2DS4P43632 304 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 GFRA1P56159 465 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 PMP22Q01453 160 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 FOXO1Q12778 655 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 KIR2DS1Q14954 304 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 ALKBH6Q3KRA9 238 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.94□□□□□ -0.66
PHF3-212ENST00000515594 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
PHF3-212ENST00000515594 CLEC18CQ8NCF0 446 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 HIST1H2BLQ99880 126 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 MAP1LC3BQ9GZQ8 125 aa10.94□□□□□ -0.66
PHF3-212ENST00000515594 ZNF816Q0VGE8 651 aaPredicted RBP10.93□□□□□ -0.66
PHF3-212ENST00000515594 NUFIP2Q7Z417 695 aaKnown RBP10.93□□□□□ -0.66
PHF3-212ENST00000515594 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 OR5P3Q8WZ94 311 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 CLN8Q9UBY8 286 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 PRSS50Q9UI38 385 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 MGAQ8IWI9 3026 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 SOX15O60248 233 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 KRASP01116 189 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 MDH2P40926 338 aaKnown RBP10.93□□□□□ -0.66
PHF3-212ENST00000515594 RIPPLY2Q5TAB7 128 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 LINC00696Q6ZRV3 163 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 LRP11Q86VZ4 500 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 OR4X1Q8NH49 305 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 KCNE4Q8WWG9 221 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 SMIM7Q9BQ49 75 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 SDF2L1Q9HCN8 221 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 LAMP3Q9UQV4 416 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 SIT1Q9Y3P8 196 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 CLDN34H7C241 214 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 PHOX2AO14813 284 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 CLDN1O95832 211 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 CELA3BP08861 270 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 CEACAM1P13688 526 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 HIST1H1BP16401 226 aaKnown RBP10.93□□□□□ -0.66
PHF3-212ENST00000515594 CYB561P49447 251 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 CD81P60033 236 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 C16orf82Q7Z2V1 217 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 H1FOOQ8IZA3 346 aaPredicted RBP10.93□□□□□ -0.66
PHF3-212ENST00000515594 FAM58AQ8N1B3 248 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 GFOD1Q9NXC2 390 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 TCFL5Q9UL49 500 aa10.93□□□□□ -0.66
PHF3-212ENST00000515594 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 HBE1P02100 147 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 SNRPCP09234 159 aaKnown RBP10.92□□□□□ -0.66
PHF3-212ENST00000515594 APLNRP35414 380 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 G6PCP35575 357 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 COL10A1Q03692 680 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 TCEAL6Q6IPX3 200 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 ACSM6Q6P461 480 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 BTNL3Q6UXE8 466 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 WDR86Q86TI4 376 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 TPRX1Q8N7U7 411 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 HIST1H2AAQ96QV6 131 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 ZNF391Q9UJN7 358 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 PILRBQ9UKJ0 227 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 TRAPPC2LQ9UL33 140 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 TNRC6AQ8NDV7 1962 aaKnown RBP10.92□□□□□ -0.66
PHF3-212ENST00000515594 ZNF737O75373 536 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 DFFBO76075 338 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 CYB5R3P00387 301 aaPredicted RBP10.92□□□□□ -0.66
PHF3-212ENST00000515594 MT-CO3P00414 261 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 IL2RGP31785 369 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 Q8NFD4 153 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 OR8G5Q8NG78 346 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 LHX4Q969G2 390 aa10.92□□□□□ -0.66
PHF3-212ENST00000515594 THOC3Q96J01 351 aaKnown RBP10.92□□□□□ -0.66
PHF3-212ENST00000515594 CEP250Q9BV73 2442 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
PHF3-212ENST00000515594 DEGS1O15121 323 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 CEACAM6P40199 344 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 TFF3Q07654 80 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 POM121Q96HA1 1249 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 POM121L2Q96KW2 1035 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 PCGF1Q9BSM1 259 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 SIRT7Q9NRC8 400 aa10.91□□□□□ -0.66
PHF3-212ENST00000515594 CISD1Q9NZ45 108 aaKnown RBP10.91□□□□□ -0.66
PHF3-212ENST00000515594 PGPEP1LA6NFU8 196 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 NDUFB7P17568 137 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 LHX2P50458 406 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 GCSAMLQ5JQS6 135 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 Q6ZS49 121 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 DRAM1Q8N682 238 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 CT55Q8WUE5 264 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 TMEM37Q8WXS4 190 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 APOBEC3DQ96AK3 386 aaPredicted RBP10.9□□□□□ -0.66
PHF3-212ENST00000515594 WDYHV1Q96HA8 205 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 TMEM204Q9BSN7 226 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 WDR61Q9GZS3 305 aaKnown RBP10.9□□□□□ -0.66
PHF3-212ENST00000515594 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 ADGRG4Q8IZF6 3080 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 C1QTNF9BB2RNN3 333 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 CDIPTO14735 213 aa10.9□□□□□ -0.66
PHF3-212ENST00000515594 PTBP3O95758 552 aaKnown RBP10.9□□□□□ -0.66
PHF3-212ENST00000515594 OR2H2O95918 312 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms