RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 HAPLN4Q86UW8 402 aa9.21□□□□□ -0.94
LIN54-207ENST00000508171 TMEM178AQ8NBL3 297 aa9.21□□□□□ -0.94
LIN54-207ENST00000508171 KLF14Q8TD94 323 aaPredicted RBP9.21□□□□□ -0.94
LIN54-207ENST00000508171 LSM10Q969L4 123 aaKnown RBP9.21□□□□□ -0.94
LIN54-207ENST00000508171 TRIB1Q96RU8 372 aa9.21□□□□□ -0.94
LIN54-207ENST00000508171 MBNL3Q9NUK0 354 aaKnown RBP9.21□□□□□ -0.94
LIN54-207ENST00000508171 WSB1Q9Y6I7 421 aa9.21□□□□□ -0.94
LIN54-207ENST00000508171 RAC2P15153 192 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 AGAP20933 346 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 TGFBR3Q03167 851 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 OR8G1Q15617 311 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 EIF2S3LQ2VIR3 472 aaKnown RBP9.2□□□□□ -0.94
LIN54-207ENST00000508171 Q8IYB0 196 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 CNEP1R1Q8N9A8 125 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 OBP2BQ9NPH6 170 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 PSENENQ9NZ42 101 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 C5orf52A6NGY3 159 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 MLNRO43193 412 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 RAMP3O60896 148 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 SCAF4O95104 1147 aaKnown RBP9.2□□□□□ -0.94
LIN54-207ENST00000508171 HAND1O96004 215 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 RPS23P62266 143 aaKnown RBP9.2□□□□□ -0.94
LIN54-207ENST00000508171 TLE4Q04727 773 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 AESQ08117 197 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 OR2B11Q5JQS5 317 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 C11orf53Q8IXP5 236 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 FGFRL1Q8N441 504 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 ZNF561Q8N587 486 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 OR1L1Q8NH94 360 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 CLDND2Q8NHS1 167 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 SMDT1Q9H4I9 107 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 FZR1Q9UM11 496 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 WIPI2Q9Y4P8 454 aa9.2□□□□□ -0.94
LIN54-207ENST00000508171 CNOT1A5YKK6 2376 aaKnown RBP9.2□□□□□ -0.94
LIN54-207ENST00000508171 BTBD17A6NE02 478 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 IQCF6A8MYZ5 107 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 DFFBO76075 338 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 OR2C1O95371 312 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 IFNA5P01569 189 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 OR3A1P47881 315 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 TRIP6Q15654 476 aaKnown RBP9.19□□□□□ -0.94
LIN54-207ENST00000508171 VWA1Q6PCB0 445 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 RBMS3Q6XE24 437 aaKnown RBP9.19□□□□□ -0.94
LIN54-207ENST00000508171 Q6ZR03 302 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 MOB1BQ7L9L4 216 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 FDCSPQ8NFU4 85 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 OR8G5Q8NG78 346 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 RAB39BQ96DA2 213 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 CLCF1Q9UBD9 225 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 S100A6P06703 90 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 WNT2P09544 360 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 HNF4GQ14541 408 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 SPANXN5Q5MJ07 72 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 Q6ZT83 130 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 OR52L2PQ8NGH6 319 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 TTC28Q96AY4 2481 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 CADP27708 2225 aa9.19□□□□□ -0.94
LIN54-207ENST00000508171 C12orf77C9JDV5 145 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 J3QW42 95 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 IFNA4P05014 189 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ACAA1P09110 424 aaPredicted RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF806P0C7X5 589 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 MEOX2P50222 304 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 LINC00205P59089 165 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 SSX7Q7RTT5 188 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF429Q86V71 674 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF525Q8N782 197 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 TPRX1Q8N7U7 411 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 SNIP1Q8TAD8 396 aaKnown RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 C5orf30Q96GV9 206 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 LIN7CQ9NUP9 197 aaKnown RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 UFSP2Q9NUQ7 469 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 GNG13Q9P2W3 67 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 SMG1Q96Q15 3661 aaKnown RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 ICE1Q9Y2F5 2266 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 KRASP01116 189 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 TAGLN2P37802 199 aaKnown RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 KIR2DL2P43627 348 aaPredicted RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 FABP6P51161 128 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 FGF8P55075 233 aaPredicted RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 RPL30P62888 115 aaKnown RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF726P1Q15940 193 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 PRAMEF6Q5VXH4 476 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 LCN15Q6UWW0 184 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF808Q8N4W9 903 aaPredicted RBP9.18□□□□□ -0.94
LIN54-207ENST00000508171 SCGB1C1Q8TD33 95 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 YPEL4Q96NS1 127 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 OR2D2Q9H210 308 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 HES4Q9HCC6 221 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 MSL2Q9HCI7 577 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 G6PCP35575 357 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 DLK1P80370 383 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 FOXF2Q12947 444 aa9.18□□□□□ -0.94
LIN54-207ENST00000508171 ZNF343Q6P1L6 599 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms