RNA–Protein interactions for RNA: ENST00000505976.5

OTUD4-206, Transcript of OTU deubiquitinase 4, human

TSL 5

Gene OTUD4, Length 671 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-206	ENST00000505976	SPHAR	Q15513	63 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	DEFB136	Q30KP8	78 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	NKAPL	Q5M9Q1	402 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	RBM48	Q5RL73	367 aa	Known RBP	13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	GLT8D1	Q68CQ7	371 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	ZNF880	Q6PDB4	577 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	ZNF833P	Q6ZTB9	187 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	C6orf201	Q7Z4U5	140 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	GALM	Q96C23	342 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	NICN1	Q9BSH3	213 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	FAAP24	Q9BTP7	215 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	TMEM59	Q9BXS4	323 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	MRPL20	Q9BYC9	149 aa	Known RBP	13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	VCX	Q9H320	206 aa		13.56	□□□□□ -0.24
OTUD4-206	ENST00000505976	TMEM14DP	A8MWL7	114 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	PTGES3L	E9PB15	166 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	SLC22A1	O15245	554 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	UCHL1	P09936	223 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	SRM	P19623	302 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	CNTFR	P26992	372 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	PSMB8	P28062	276 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	MMD	Q15546	238 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	DEFB121	Q5J5C9	76 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	OR8U1	Q8NH10	309 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	MYOZ3	Q8TDC0	251 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	RITA1	Q96K30	269 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	KCTD7	Q96MP8	289 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	ZNF107	Q9UII5	783 aa	Predicted RBP	13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	LRRC42	Q9Y546	428 aa		13.55	□□□□□ -0.24
OTUD4-206	ENST00000505976	SAA2-SAA4	A0A096LPE2	208 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976		A0A0A6YYD4	124 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	ANKRD65	E5RJM6	399 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	RGS11	O94810	467 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	NAPSA	O96009	420 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	SAA2	P0DJI9	122 aa	Predicted RBP	13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	SLC2A2	P11168	524 aa	Predicted RBP	13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	VDAC1	P21796	283 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	MYF6	P23409	242 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	PPIF	P30405	207 aa	Known RBP	13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	ACTB	P60709	375 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	HSD17B12	Q53GQ0	312 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	CEACAM19	Q7Z692	300 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	SVOP	Q8N4V2	548 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	KCNG3	Q8TAE7	436 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	IFI27L2	Q9H2X8	130 aa		13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.54	□□□□□ -0.24
OTUD4-206	ENST00000505976	HLA-DRB1	P01911	266 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	OR3A3	P47888	321 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	MED22	Q15528	200 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	C11orf87	Q6NUJ2	197 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	FAM71F2	Q6NXP2	309 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	C4orf3	Q8WVX3	66 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	GFI1	Q99684	422 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	ZNF251	Q9BRH9	671 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	CHCHD6	Q9BRQ6	235 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	SCN3B	Q9NY72	215 aa		13.53	□□□□□ -0.24
OTUD4-206	ENST00000505976	TRBV6-6	A0A0A6YYG2	114 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	IGHV7-81	A0A0B4J1V7	117 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	ATP6V0E1	O15342	81 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	NBR2	O15453	112 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	NDUFA3	O95167	84 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	BPNT1	O95861	308 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR5H8	P0DN80	308 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	BLVRB	P30043	206 aa	Predicted RBP	13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	AQP4	P55087	323 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	RAB25	P57735	213 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	FHL3	Q13643	280 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	KIAA0141	Q14154	515 aa	Predicted RBP	13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	VAX1	Q5SQQ9	334 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	LIPK	Q5VXJ0	399 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	TMEM91	Q6ZNR0	172 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	NPB	Q8NG41	125 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR2AK2	Q8NG84	335 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR6M1	Q8NGM8	313 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	B9D2	Q9BPU9	175 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	ANKRD60	Q9BZ19	345 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	LPAR5	Q9H1C0	372 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR51J1	Q9H342	316 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976	ABRACL	Q9P1F3	81 aa		13.52	□□□□□ -0.25
OTUD4-206	ENST00000505976		G3V318	75 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	DGCR2	P98153	550 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	TPBG	Q13641	420 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	C5orf64	Q2M2E5	130 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	MOB1B	Q7L9L4	216 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	FAM89B	Q8N5H3	189 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	OR5M8	Q8NGP6	311 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	NRG4	Q8WWG1	115 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	IL1F10	Q8WWZ1	152 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	UFD1	Q92890	307 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	KLK15	Q9H2R5	256 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	DUSP21	Q9H596	190 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	ISYNA1	Q9NPH2	558 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	PIPOX	Q9P0Z9	390 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	ZMAT5	Q9UDW3	170 aa	Known RBP	13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	STEAP1	Q9UHE8	339 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	DNAH9	Q9NYC9	4486 aa		13.51	□□□□□ -0.25
OTUD4-206	ENST00000505976	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	SLC17A2	O00624	439 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	ST8SIA5	O15466	376 aa		13.5	□□□□□ -0.25
OTUD4-206	ENST00000505976	SOCS1	O15524	211 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms