RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 TNFRSF1BP20333 461 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 CLDN17P56750 224 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 ZP4Q12836 540 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 Q6ZPB1 254 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SCD5Q86SK9 330 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 LINC01551Q86U37 167 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SCAMP5Q8TAC9 235 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 FER1L6-AS2Q96M78 137 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 A0A1W2PQM1 296 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 PGPEP1LA6NFU8 196 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 RPL36A-HNRNPH2H7BZ11 118 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 TUSC2O75896 110 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SRD5A1P18405 259 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 GPR6P46095 362 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 RAC3P60763 192 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 PSG9Q00887 426 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 DCAF12Q5T6F0 453 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 GDF6Q6KF10 455 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 IKZF5Q9H5V7 419 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 CGGBP1Q9UFW8 167 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 DAPP1Q9UN19 280 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 LRP12Q9Y561 859 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM207Q6UWW9 146 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SLC25A40Q8TBP6 338 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM186Q96B77 213 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 GGTLC1Q9BX51 225 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 TMPRSS2O15393 492 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 PLNP26678 52 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 HOXD9P28356 352 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SOX8P57073 446 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 MED25Q71SY5 747 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 FBXL14Q8N1E6 418 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 CCL27Q9Y4X3 112 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 A0A1W2PNV4 684 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF860A6NHJ4 632 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 KISS1Q15726 138 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 CST9LQ9H4G1 147 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF106Q9H2Y7 1883 aaKnown RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 VIPR2P41587 438 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 DLX1P56177 255 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SSBP2P81877 361 aaPredicted RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 RPL18Q07020 188 aaKnown RBP5.32□□□□□ -1.56
LINC02397-201ENST00000504409 OR11H4Q8NGC9 324 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 SH3BGRL3Q9H299 93 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 IL36RNQ9UBH0 155 aa5.32□□□□□ -1.56
LINC02397-201ENST00000504409 IGHV2-70DA0A0C4DH43 119 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 A8MWV9 139 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 FGF17O60258 216 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF205O95201 554 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TSPAN13O95857 204 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 PLAUP00749 431 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 VMA21Q3ZAQ7 101 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ASCL5Q7RTU5 278 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 SPACA9Q96E40 222 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 AMMECR1Q9Y4X0 333 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 F13BP05160 661 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 UCP1P25874 307 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TSPOP30536 169 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 FCGR2BP31994 310 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 C2orf68Q2NKX9 166 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 EAF1Q96JC9 268 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF703Q9H7S9 590 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF346Q9UL40 294 aaKnown RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TP53BP1Q12888 1972 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 IGHV1-24A0A0C4DH33 117 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 CEACAM18A8MTB9 384 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 MRPL23Q16540 153 aaKnown RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 OR1K1Q8NGR3 316 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 ZNF414Q96IQ9 312 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GPR82Q96P67 336 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 KLF16Q9BXK1 252 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 HRASLS2Q9NWW9 162 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 PRAMEF26H0Y7S4 382 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 LDLRAD4O15165 306 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 IZUMO4Q1ZYL8 232 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 MMD2Q8IY49 270 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GNG12Q9UBI6 72 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM56-RWDD3S4R434 201 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 FRMPD3Q5JV73 1810 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 J3KT08 172 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TMEM50AO95807 157 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 VSIG10L2P0DP72 767 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 DRD3P35462 400 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 HINT1P49773 126 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 RBPMS2Q6ZRY4 209 aaKnown RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 LYPD6BQ8NI32 183 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 KISS1RQ969F8 398 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 HIST1H4GQ99525 98 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 RTP3Q9BQQ7 232 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 TM2D1Q9BX74 207 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 CACNG4Q9UBN1 327 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 EPPINO95925 133 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GAGE5Q13069 117 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GAGE6Q13070 117 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 CMTM8Q8IZV2 173 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 CIARTQ8N365 385 aaPredicted RBP5.31□□□□□ -1.56
LINC02397-201ENST00000504409 GATAD1Q8WUU5 269 aa5.31□□□□□ -1.56
LINC02397-201ENST00000504409 SIGLEC8Q9NYZ4 499 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms