RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 DEGS1O15121 323 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CXCL13O43927 109 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 STAG3L2P0CL84 134 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 SRFP11831 508 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 B4GALT1P15291 398 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 MGMTP16455 207 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 AZU1P20160 251 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CSRP1P21291 193 aaKnown RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DUSP3P51452 185 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 TIAL1Q01085 375 aaKnown RBP eCLIP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF816Q0VGE8 651 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CATR1Q13166 79 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 HES1Q14469 280 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GUK1Q16774 197 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CR1LQ2VPA4 569 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 FBLN7Q53RD9 439 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 AWAT1Q58HT5 328 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF787Q6DD87 383 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 RPL7L1Q6DKI1 246 aaKnown RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OPN5Q6U736 354 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CBLN3Q6UW01 205 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 TOMM20LQ6UXN7 152 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DND1Q8IYX4 353 aaKnown RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC38A9Q8NBW4 561 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GJC3Q8NFK1 279 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF799Q96GE5 643 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 KIRREL1Q96J84 757 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR10C1Q96KK4 312 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 LRFN3Q9BTN0 628 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 RSG1Q9BU20 258 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 NMES1Q9C002 83 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CHST6Q9GZX3 395 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZDHHC11Q9H8X9 412 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DYNLRB1Q9NP97 96 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF331Q9NQX6 463 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GPR27Q9NS67 375 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 HSF4Q9ULV5 492 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DCHS1Q96JQ0 3298 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 FER1L5A0AVI2 2057 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 KIAA2026Q5HYC2 2103 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 VPS13AQ96RL7 3174 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 LRP5LA4QPB2 252 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR5B21A6NL26 309 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 BMPR1BO00238 502 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 RER1O15258 196 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 RAMP1O60894 148 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 FHITP49789 147 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 HNRNPA3P51991 378 aaKnown RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC25A1P53007 311 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 PLAURQ03405 335 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF626Q68DY1 528 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 C11orf87Q6NUJ2 197 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CALHM1Q8IU99 346 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 FBXL14Q8N1E6 418 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 C1orf162Q8NEQ5 155 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4P4Q8NGL7 312 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR1N2Q8NGR9 330 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 NRGNQ92686 78 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ARHGAP5-AS1Q96IT6 56 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GINS3Q9BRX5 216 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DEFB127Q9H1M4 99 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 MEGF9Q9H1U4 602 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 NECAP2Q9NVZ3 263 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 SIGLEC7Q9Y286 467 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GTF3C1Q12789 2109 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 FANCMQ8IYD8 2048 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 A0A1B0GW15 77 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 C5orf49A4QMS7 147 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GJE1A6NN92 205 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DEFB108AA8MXU0 73 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ACACBO00763 2458 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 TAX1BP3O14907 124 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 SPINT2O43291 252 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 FGF7P21781 194 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF121P58317 390 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GNB2P62879 340 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 MGAT2Q10469 447 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR8B8Q15620 311 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 WDR38Q5JTN6 314 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 TMEM215Q68D42 235 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 GLDNQ6ZMI3 551 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 H2BFWTQ7Z2G1 175 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 C6orf201Q7Z4U5 140 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 RPS19BP1Q86WX3 136 aaKnown RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 CALHM3Q86XJ0 350 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR10G3Q8NGC4 313 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4D11Q8NGI4 311 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 DDB2Q92466 427 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 PTX4Q96A99 478 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 MSI2Q96DH6 328 aaKnown RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 MIEN1Q9BRT3 115 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 RTBDNQ9BSG5 229 aaPredicted RBP3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 PLEKHF2Q9H8W4 249 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 WSB1Q9Y6I7 421 aa3.18□□□□□ -1.9
PCDH11X-208ENST00000504220 WDR87Q6ZQQ6 2873 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 TDRD6O60522 2096 aaKnown RBP3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 MPDZO75970 2070 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 HEATR5BQ9P2D3 2071 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 LOC102723971A0A1B0GUV8 181 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms