RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C17orf100A8MU93 164 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 IGKV1-39P01597 117 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 IGKV1D-39P04432 117 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4L2P0CJ85 424 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4L3P0CJ86 424 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4L4P0CJ87 422 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4L5P0CJ88 424 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4L6P0CJ89 424 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4L7P0CJ90 424 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 GZMHP20718 246 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 TMEM33P57088 247 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 EIF4EBP1Q13541 118 aaPredicted RBP17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 FBXL19-AS1Q494R0 122 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 GPR157Q5UAW9 335 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 NINJ1Q92982 152 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 SDSLQ96GA7 329 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 C5orf30Q96GV9 206 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 NCOR1P1Q9H4R4 102 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 PLEKHF2Q9H8W4 249 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 OR2S2Q9NQN1 319 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 DUX4Q9UBX2 424 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 FBXL17Q9UF56 701 aa17.79■□□□□ 0.44
UBE2D3-216ENST00000503742 A0A0G2JRQ6 117 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 DLL1O00548 723 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 SPINT2O43291 252 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 GPR137BO60478 399 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 DYSFO75923 2080 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 CYB5R3P00387 301 aaPredicted RBP17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 SLC25A6P12236 298 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 PPP1CCP36873 323 aaKnown RBP17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 ID3Q02535 119 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 ZNF585BQ52M93 769 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 NCMAPQ5T1S8 102 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 ZNF561Q8N587 486 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 OR2D2Q9H210 308 aa17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 BARX1Q9HBU1 254 aaPredicted RBP17.78■□□□□ 0.44
UBE2D3-216ENST00000503742 SHISA9B4DS77 424 aa17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 PITX3O75364 302 aa17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 GAPDHP04406 335 aaKnown RBP17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 RPL7L1Q6DKI1 246 aaKnown RBP17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 RFESDQ8TAC1 157 aa17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 LSM10Q969L4 123 aaKnown RBP17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 GPR146Q96CH1 333 aa17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 RNF150Q9ULK6 438 aa17.77■□□□□ 0.44
UBE2D3-216ENST00000503742 RNF212BA8MTL3 300 aa17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 SCO1O75880 301 aa17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 POLR2GP62487 172 aaKnown RBP eCLIP17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 CXorf66Q5JRM2 361 aaPredicted RBP17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 HSD17B13Q7Z5P4 300 aaPredicted RBP17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 DMRTC2Q8IXT2 367 aaPredicted RBP17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 EIF4E3Q8N5X7 224 aaKnown RBP17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 ESRP2Q9H6T0 727 aaKnown RBP17.77■□□□□ 0.43
UBE2D3-216ENST00000503742 ZZEF1O43149 2961 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 A8MXK9 166 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 FGF16O43320 207 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 TNFRSF1AP19438 455 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 EIF5AP63241 154 aaKnown RBP17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 TEX36Q5VZQ5 186 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 TGIF2LYQ8IUE0 185 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 BSCL2Q96G97 398 aaPredicted RBP17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 SPTA1P02549 2419 aa17.76■□□□□ 0.43
UBE2D3-216ENST00000503742 IGHV3-43A0A0B4J1X8 118 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 A0A1B0GU03 582 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 MEX3AA1L020 520 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 CCL21O00585 134 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 IGHV3-43DP0DP04 118 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 CHRNB4P30926 498 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 CCL8P80075 99 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 TMED6Q8WW62 240 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 ADGRG4Q8IZF6 3080 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 VSTM5A8MXK1 200 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 JTBO76095 146 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 CGB3P0DN86 165 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 CGB7P0DN87 165 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 SELLP14151 372 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 C14orf79Q96F83 325 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 GAFA1Q96PS6 74 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 AGMATQ9BSE5 352 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 DCAF16Q9NXF7 216 aa17.75■□□□□ 0.43
UBE2D3-216ENST00000503742 RAI1Q7Z5J4 1906 aaPredicted RBP17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 E7EQL1 145 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 F2RL2O00254 374 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 IGKV1-5P01602 117 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 IRF2P14316 349 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 MMP9P14780 707 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 MUC1P15941 1255 aaPredicted RBP17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 ZNF16P17020 682 aaPredicted RBP17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 ZNF788Q6ZQV5 615 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 PLPPR2Q96GM1 343 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 PRORYQ9H606 182 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 JPT1Q9UK76 154 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 DSCAML1Q8TD84 2053 aa17.74■□□□□ 0.43
UBE2D3-216ENST00000503742 FGF2P09038 288 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 FAM157CP0CG43 387 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 RPL30P62888 115 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 TLE1Q04724 770 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 DUX4L9Q6RFH8 374 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 CLEC9AQ6UXN8 241 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 Q6ZRM9 215 aa17.73■□□□□ 0.43
UBE2D3-216ENST00000503742 ZCCHC24Q8N2G6 241 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms