RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 WRBO00258 174 aa18.83■□□□□ 0.6
PCDH1-204ENST00000503492 ATG12O94817 140 aa18.83■□□□□ 0.6
PCDH1-204ENST00000503492 DANCRP0C864 163 aa18.83■□□□□ 0.6
PCDH1-204ENST00000503492 MUC1P15941 1255 aaPredicted RBP18.83■□□□□ 0.6
PCDH1-204ENST00000503492 TDGF1P3P51864 188 aa18.83■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF645Q8N7E2 425 aa18.83■□□□□ 0.6
PCDH1-204ENST00000503492 LYPD6BQ8NI32 183 aa18.83■□□□□ 0.6
PCDH1-204ENST00000503492 ATP6V1G2-DDX39BF2Z307 99 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 F2RL1P55085 397 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 DOLPP1Q86YN1 238 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 C5orf30Q96GV9 206 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 OR2V2Q96R30 315 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 TOLLIPQ9H0E2 274 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 CACNA1DQ01668 2161 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 CST7O76096 145 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 SSTR5P35346 364 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF295-AS1Q8N0V1 137 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 CISD2Q8N5K1 135 aaKnown RBP18.82■□□□□ 0.6
PCDH1-204ENST00000503492 GCSAMQ8N6F7 178 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 OR10Z1Q8NGY1 313 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 OR2D2Q9H210 308 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 UQCC1Q9NVA1 299 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 CACNG5Q9UF02 275 aa18.82■□□□□ 0.6
PCDH1-204ENST00000503492 IGKV1D-17A0A075B6S4 117 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 MEX3AA1L020 520 aaKnown RBP18.81■□□□□ 0.6
PCDH1-204ENST00000503492 AGPAT2O15120 278 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF737O75373 536 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 SPACA3Q8IXA5 215 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 Q8NA96 180 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 MEGF10Q96KG7 1140 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 LURAP1Q96LR2 239 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 DCTN5Q9BTE1 182 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 IGLV3-9A0A075B6K5 115 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 PPP1CCP36873 323 aaKnown RBP18.81■□□□□ 0.6
PCDH1-204ENST00000503492 CFHR2P36980 270 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 C10orf91Q5T1B1 145 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 OR5C1Q8NGR4 320 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 TSNAXQ99598 290 aaKnown RBP18.81■□□□□ 0.6
PCDH1-204ENST00000503492 CACFD1Q9UGQ2 172 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 SPTBN2O15020 2390 aa18.81■□□□□ 0.6
PCDH1-204ENST00000503492 APC2O95996 2303 aa18.8■□□□□ 0.6
PCDH1-204ENST00000503492 SPRY3O43610 288 aa18.8■□□□□ 0.6
PCDH1-204ENST00000503492 FHITP49789 147 aa18.8■□□□□ 0.6
PCDH1-204ENST00000503492 DYNLT3P51808 116 aa18.8■□□□□ 0.6
PCDH1-204ENST00000503492 NUPL2O15504 423 aaKnown RBP18.79■□□□□ 0.6
PCDH1-204ENST00000503492 C1QL1O75973 258 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 CCKARP32238 428 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 EIF4EBP1Q13541 118 aaPredicted RBP18.79■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF266Q14584 549 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 GUCA2BQ16661 112 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 MOGAT3Q86VF5 341 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 ZBTB34Q8NCN2 500 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 RFESDQ8TAC1 157 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 C17orf50Q8WW18 174 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 NINJ1Q92982 152 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 RFNGQ9Y644 331 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 IGHV3OR15-7A0A075B7D8 119 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 A0A0G2JNJ9 132 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 RNF212BA8MTL3 300 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 F8W036 122 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 RPL30P62888 115 aaKnown RBP18.79■□□□□ 0.6
PCDH1-204ENST00000503492 PAX5Q02548 391 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 EDDM3AQ14507 147 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF273Q14593 569 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF808Q8N4W9 903 aaPredicted RBP18.79■□□□□ 0.6
PCDH1-204ENST00000503492 TMEM217Q8N7C4 229 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 SCNM1Q9BWG6 230 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 MRPL37Q9BZE1 423 aaKnown RBP18.79■□□□□ 0.6
PCDH1-204ENST00000503492 NKX6-2Q9C056 277 aaPredicted RBP18.79■□□□□ 0.6
PCDH1-204ENST00000503492 Q9UFV3 132 aa18.79■□□□□ 0.6
PCDH1-204ENST00000503492 IGHV3-43A0A0B4J1X8 118 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 PRRG2O14669 202 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 IGHV3-43DP0DP04 118 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 BAXQ07812 192 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 ITLN1Q8WWA0 313 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 ACACAQ13085 2346 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 RNASEK-C17orf49H0YIS7 233 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 C15orf65H3BRN8 121 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 FAM90A1Q86YD7 464 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 SPAG16Q8N0X2 631 aa18.78■□□□□ 0.6
PCDH1-204ENST00000503492 CARHSP1Q9Y2V2 147 aaKnown RBP18.78■□□□□ 0.6
PCDH1-204ENST00000503492 ANKRD11Q6UB99 2663 aaPredicted RBP18.78■□□□□ 0.6
PCDH1-204ENST00000503492 DNASE2O00115 360 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-204ENST00000503492 TSPAN4O14817 238 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 CD5P06127 495 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 ATP6V0CP27449 155 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 CAMLGP49069 296 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 ZNF616Q08AN1 781 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 TBR1Q16650 682 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 MIDNQ504T8 468 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 TMEM182Q6ZP80 229 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-204ENST00000503492 PUSL1Q8N0Z8 303 aaKnown RBP18.77■□□□□ 0.6
PCDH1-204ENST00000503492 FGFRL1Q8N441 504 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 COL25A1Q9BXS0 654 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-204ENST00000503492 H3BP45 60 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 RAMP3O60896 148 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 CD40P25942 277 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 RAB40CQ96S21 281 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 C19orf12Q9NSK7 152 aa18.77■□□□□ 0.6
PCDH1-204ENST00000503492 LHBP01229 141 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms