RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
SCLT1-205ENST00000503401 AMMECR1Q9Y4X0 333 aaPredicted RBP13.3□□□□□ -0.28
SCLT1-205ENST00000503401 POMT1Q9Y6A1 747 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 POM121CA8CG34 1229 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 CTDSP2O14595 271 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 BET1O15155 118 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 RGS5O15539 181 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 YPEL1O60688 119 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 CD24P25063 80 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 CEACAM3P40198 252 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 CEACAM6P40199 344 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 PITPNAQ00169 270 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 STEAP3Q658P3 488 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 LINC00311Q8N616 119 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 TMEM86BQ8N661 226 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 TOMM40LQ969M1 308 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 CREB3L1Q96BA8 519 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 MDFIQ99750 246 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 OCSTAMPQ9BR26 566 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 ABHD14AQ9BUJ0 271 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 MIXL1Q9H2W2 232 aa13.29□□□□□ -0.28
SCLT1-205ENST00000503401 BTBD17A6NE02 478 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 RNF212BA8MTL3 300 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 VGLL3A8MV65 326 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 ZBTB25P24278 435 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 KIR2DS4P43632 304 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 KIR2DS1Q14954 304 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 C16orf87Q6PH81 154 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 LAX1Q8IWV1 398 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 C8orf31Q8N9H6 132 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 OR2AK2Q8NG84 335 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 OR4A4PQ8NGN8 299 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 FAM216AQ8WUB2 273 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
SCLT1-205ENST00000503401 ABCB10Q9NRK6 738 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 FAM181BA6NEQ2 426 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 HSD17B6O14756 317 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 ST8SIA5O15466 376 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 RGS11O94810 467 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 HLA-DQB1P01920 261 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 Q3ZCU0 254 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 SNX29P2Q8IUI4 249 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 OR5R1Q8NH85 324 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 C19orf24Q9BVV8 132 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 C6orf62Q9GZU0 229 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-205ENST00000503401 EXTL2Q9UBQ6 330 aa13.28□□□□□ -0.28
SCLT1-205ENST00000503401 GPR137BO60478 399 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 AANATQ16613 207 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
SCLT1-205ENST00000503401 FBLN7Q53RD9 439 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 Q6ZS49 121 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 TMEM219Q86XT9 240 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 TMEM158Q8WZ71 300 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.29
SCLT1-205ENST00000503401 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 RDH8Q9NYR8 311 aa13.27□□□□□ -0.29
SCLT1-205ENST00000503401 A0A1W2PPI3 338 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 TIMM23O14925 209 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 OR3A3P47888 321 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 KRTAP21-3Q3LHN1 58 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 CCBE1Q6UXH8 406 aaPredicted RBP13.26□□□□□ -0.29
SCLT1-205ENST00000503401 ODF3L1Q8IXM7 274 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 OR56B4Q8NH76 319 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 OR10J5Q8NHC4 309 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 ZFAND2BQ8WV99 257 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 ST6GALNAC6Q969X2 333 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 ABHD14BQ96IU4 210 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 C11orf54Q9H0W9 315 aaPredicted RBP13.26□□□□□ -0.29
SCLT1-205ENST00000503401 IFI27L2Q9H2X8 130 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
SCLT1-205ENST00000503401 TRBV6-7A0A0A0MS04 114 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 IL3RAP26951 378 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 ACTG1P63261 375 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 LY6G6FQ5SQ64 297 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 CCDC144NLQ6NUI1 221 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 DRAM1Q8N682 238 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 MCFD2Q8NI22 146 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 RTN4IP1Q8WWV3 396 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-205ENST00000503401 GINS4Q9BRT9 223 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 RNF150Q9ULK6 438 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 TCF19Q9Y242 345 aa13.25□□□□□ -0.29
SCLT1-205ENST00000503401 SAA2-SAA4A0A096LPE2 208 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 IGHV1-3A0A0C4DH29 117 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 OOSP1A8MZH6 123 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 CHST1O43916 411 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 SAA2P0DJI9 122 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-205ENST00000503401 PRSS3P35030 304 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 RAB7AP51149 207 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 DYNLT3P51808 116 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 RNASE12Q5GAN4 147 aaKnown RBP13.24□□□□□ -0.29
SCLT1-205ENST00000503401 MOB3BQ86TA1 216 aa13.24□□□□□ -0.29
SCLT1-205ENST00000503401 HOGA1Q86XE5 327 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms