RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 THBDP07204 575 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 OR11H6Q8NGC7 330 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 FGF14Q92915 247 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 DERL1Q9BUN8 251 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 SSBP3Q9BWW4 388 aaPredicted RBP5.13□□□□□ -1.59
USF3-204ENST00000496826 SMOC1Q9H4F8 434 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 GORASP2Q9H8Y8 452 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 METRNQ9UJH8 293 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 DSPPQ9NZW4 1301 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 SPTBN1Q01082 2364 aaKnown RBP5.13□□□□□ -1.59
USF3-204ENST00000496826 ADGRB3O60242 1522 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 PCF11O94913 1555 aaKnown RBP5.13□□□□□ -1.59
USF3-204ENST00000496826 CGB7P0DN87 165 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 ALOX5APP20292 161 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 LMO2P25791 158 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 P2RY1P47900 373 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 SPATA45Q537H7 98 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 NEGR1Q7Z3B1 354 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 OR10D3Q8NH80 312 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 C8orf46Q8TAG6 207 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 DUX3Q96PT4 197 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 ERG28Q9UKR5 140 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 PCOLCE2Q9UKZ9 415 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 FOXI3A8MTJ6 420 aaPredicted RBP5.13□□□□□ -1.59
USF3-204ENST00000496826 AHRRA9YTQ3 701 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 C1QBP02746 253 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 NPPCP23582 126 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 MPLP40238 635 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 LILRA4P59901 499 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 FAM78BQ5VT40 261 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 CENPVQ7Z7K6 275 aaPredicted RBP5.13□□□□□ -1.59
USF3-204ENST00000496826 MMD2Q8IY49 270 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 OR8B12Q8NGG6 310 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 FBXO17Q96EF6 278 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 SLC50A1Q9BRV3 221 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 KIAA2026Q5HYC2 2103 aa5.13□□□□□ -1.59
USF3-204ENST00000496826 CXorf65A6NEN9 183 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 LEUTXA8MZ59 168 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 TEX22C9J3V5 150 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SIGLEC5O15389 551 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 TMIGD3P0DMS9 266 aaPredicted RBP5.12□□□□□ -1.59
USF3-204ENST00000496826 COX7A1P24310 79 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MMP16P51512 607 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SIGLEC14Q08ET2 396 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 LRRC75AQ8NAA5 344 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MRGPRFQ96AM1 343 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MGST3O14880 152 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 PROP1O75360 226 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SOD2P04179 222 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 CFHP08603 1231 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 CDKN1AP38936 164 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 LY6KQ17RY6 165 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 BEX5Q5H9J7 111 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 PRSS27Q9BQR3 290 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MEGF9Q9H1U4 602 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 PRTN3P24158 256 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 POLR2GP62487 172 aaKnown RBP eCLIP5.12□□□□□ -1.59
USF3-204ENST00000496826 TCEAL8Q8IYN2 117 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 COQ2Q96H96 371 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 TRAF4Q9BUZ4 470 aaPredicted RBP5.12□□□□□ -1.59
USF3-204ENST00000496826 CTXND1A0A1B0GTU2 59 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 NPIPB7O75200 414 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SFTA3P0C7M3 94 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 ESDP10768 282 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 CSF2RBP32927 897 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 ABHD12Q8N2K0 398 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MRGPRX1Q96LB2 322 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SIGLEC11Q96RL6 698 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 BCL2L10Q9HD36 194 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 CTLA4P16410 223 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 PSG5Q15238 335 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 C9orf50Q5SZB4 431 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 PRR7Q8TB68 274 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 TAF15Q92804 592 aaKnown RBP eCLIP5.12□□□□□ -1.59
USF3-204ENST00000496826 ISL2Q96A47 359 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 SDF2Q99470 211 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 IL18BPO95998 194 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 CCL3P10147 92 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 GALP22466 123 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 NKAIN4Q8IVV8 208 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 RIMKLAQ8IXN7 391 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 OR4C3Q8NH37 302 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 CLDND2Q8NHS1 167 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 ALKBH3Q96Q83 286 aaPredicted RBP5.12□□□□□ -1.59
USF3-204ENST00000496826 SIT1Q9Y3P8 196 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 A0A1W2PRU2 124 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 IGLON5A6NGN9 336 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 J3KRW8 73 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 IAPPP10997 89 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MUC1P15941 1255 aaPredicted RBP5.12□□□□□ -1.59
USF3-204ENST00000496826 C1orf140Q5VVS0 124 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 STHQ8IWL8 128 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 STPG2Q8N412 459 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 MRPL43Q8N983 215 aaKnown RBP5.12□□□□□ -1.59
USF3-204ENST00000496826 TMEM229BQ8NBD8 167 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 C2CD4AQ8NCU7 369 aaPredicted RBP5.12□□□□□ -1.59
USF3-204ENST00000496826 ROBO4Q8WZ75 1007 aa5.12□□□□□ -1.59
USF3-204ENST00000496826 INSL5Q9Y5Q6 135 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms