RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 HMGN3Q15651 99 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 SMIM21Q3B7S5 101 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 ATRAIDQ6UW56 229 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 LRRC29Q8WV35 223 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 DIRC2Q96SL1 478 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 IL19Q9UHD0 177 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 PCNX1Q96RV3 2341 aa17.74■□□□□ 0.43
FGFR1-223ENST00000496296 FASNP49327 2511 aaKnown RBP17.73■□□□□ 0.43
FGFR1-223ENST00000496296 BORCS7-ASMTA0A0B4J1R7 106 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.73■□□□□ 0.43
FGFR1-223ENST00000496296 DNASE2O00115 360 aaPredicted RBP17.73■□□□□ 0.43
FGFR1-223ENST00000496296 SEC11BP0C7V7 166 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 GNLYP22749 145 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 F2RP25116 425 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 TNFAIP6P98066 277 aaPredicted RBP17.73■□□□□ 0.43
FGFR1-223ENST00000496296 GNMTQ14749 295 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 ACP7Q6ZNF0 438 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 LYPD6BQ8NI32 183 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 AKR1E2Q96JD6 320 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 PLA2G2EQ9NZK7 142 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 C3orf80F5H4A9 247 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 HSD17B6O14756 317 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 ATG12O94817 140 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 HAND1O96004 215 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 IGHV1-46P01743 117 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 GRNP28799 593 aaKnown RBP17.73■□□□□ 0.43
FGFR1-223ENST00000496296 CDSNQ15517 529 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 BTNL8Q6UX41 500 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 OR10V1Q8NGI7 309 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 OR14J1Q9UGF5 321 aa17.73■□□□□ 0.43
FGFR1-223ENST00000496296 SHISA9B4DS77 424 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 SIRPB1O00241 398 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 CFHR2P36980 270 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 GATA4P43694 442 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 NKX2-1P43699 371 aaPredicted RBP17.72■□□□□ 0.43
FGFR1-223ENST00000496296 ID3Q02535 119 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 ITLN1Q8WWA0 313 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 BSCL2Q96G97 398 aaPredicted RBP17.72■□□□□ 0.43
FGFR1-223ENST00000496296 NKX6-2Q9C056 277 aaPredicted RBP17.72■□□□□ 0.43
FGFR1-223ENST00000496296 WFDC1Q9HC57 220 aa17.72■□□□□ 0.43
FGFR1-223ENST00000496296 WNT9BO14905 357 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 DEFA5Q01523 94 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 TLE1Q04724 770 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 TESK1Q15569 626 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 MOGAT3Q86VF5 341 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 ZNF808Q8N4W9 903 aaPredicted RBP17.71■□□□□ 0.43
FGFR1-223ENST00000496296 CARHSP1Q9Y2V2 147 aaKnown RBP17.71■□□□□ 0.43
FGFR1-223ENST00000496296 HEXAP06865 529 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 PVALBP20472 110 aaPredicted RBP17.71■□□□□ 0.43
FGFR1-223ENST00000496296 LPAR6P43657 344 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 UQCRFS1P47985 274 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 CAV2P51636 162 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 DMRTC2Q8IXT2 367 aaPredicted RBP17.71■□□□□ 0.43
FGFR1-223ENST00000496296 TOLLIPQ9H0E2 274 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 RNF115Q9Y4L5 304 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 CADP27708 2225 aa17.71■□□□□ 0.43
FGFR1-223ENST00000496296 ADAM20O43506 726 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 IGLV2-14P01704 120 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 SPP1P10451 314 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 AGAP20933 346 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 FAM90A1Q86YD7 464 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 SPAG16Q8N0X2 631 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 OR2C3Q8N628 320 aa17.7■□□□□ 0.42
FGFR1-223ENST00000496296 SRRM5B3KS81 715 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 PITX3O75364 302 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 MED6O75586 246 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 CLDN14O95500 239 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 ADH4P08319 380 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 TNFRSF1AP19438 455 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 APOBEC3AP31941 199 aaPredicted RBP17.69■□□□□ 0.42
FGFR1-223ENST00000496296 EWSR1Q01844 656 aaKnown RBP eCLIP17.69■□□□□ 0.42
FGFR1-223ENST00000496296 SLC35E4Q6ICL7 350 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 SVBPQ8N300 66 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 NARS2Q96I59 477 aaKnown RBP17.69■□□□□ 0.42
FGFR1-223ENST00000496296 SMIM3Q9BZL3 60 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 FAM212BQ9NTI7 297 aaPredicted RBP17.69■□□□□ 0.42
FGFR1-223ENST00000496296 LYRM2Q9NU23 88 aaPredicted RBP17.69■□□□□ 0.42
FGFR1-223ENST00000496296 OR1A1Q9P1Q5 309 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 TRAPPC2LQ9UL33 140 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 NBASA2RRP1 2371 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 C17orf100A8MU93 164 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 E7EQL1 145 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 IFNL4K9M1U5 179 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 TOR1AO14656 332 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 F2RL1P55085 397 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 TFF3Q07654 80 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 FAM122CQ6P4D5 195 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 LSM10Q969L4 123 aaKnown RBP17.69■□□□□ 0.42
FGFR1-223ENST00000496296 PLEKHF2Q9H8W4 249 aa17.69■□□□□ 0.42
FGFR1-223ENST00000496296 HELZ2Q9BYK8 2649 aaKnown RBP17.68■□□□□ 0.42
FGFR1-223ENST00000496296 A0A1B0GU03 582 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 TMEM30CPA0ZSE6 113 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 DANCRP0C864 163 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 CTRB1P17538 263 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 RAB5CP51148 216 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 PAX5Q02548 391 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 CTRB2Q6GPI1 263 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 SLC25A31Q9H0C2 315 aa17.68■□□□□ 0.42
FGFR1-223ENST00000496296 SEBOXQ9HB31 216 aaPredicted RBP17.68■□□□□ 0.42
FGFR1-223ENST00000496296 RELNP78509 3460 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms