RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 CHIAQ9BZP6 476 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 CALYQ9NYX4 217 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 hCG_1809904A0A1W2PP81 198 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 A0A1W2PPE2 198 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 A0A1W2PR64 198 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 A0A1W2PRV1 198 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 CENPXA8MT69 81 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 M0QYG6 137 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 SDCBPO00560 298 aaPredicted RBP11.12□□□□□ -0.63
CDK9-204ENST00000491521 BET1O15155 118 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 HSPA12AO43301 675 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 RAB3DO95716 219 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 IGHV4-59P01825 116 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 AKAIN1P0CW23 69 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 SSTR5P35346 364 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 CDK10Q15131 360 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 HMGN3Q15651 99 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 ACTBL2Q562R1 376 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 IGSF11Q5DX21 431 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 RNASE10Q5GAN6 216 aaKnown RBP11.12□□□□□ -0.63
CDK9-204ENST00000491521 Q6ZS49 121 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 ZNF554Q86TJ5 538 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 PNKDQ8N490 385 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 TRIM63Q969Q1 353 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 KIRREL1Q96J84 757 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 NECAP2Q9NVZ3 263 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 IDI2-AS1Q9NZ38 188 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 KPTNQ9Y664 436 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 MEGF8Q7Z7M0 2845 aa11.12□□□□□ -0.63
CDK9-204ENST00000491521 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 CTXN2P0C2S0 81 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 CGB3P0DN86 165 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 CGB7P0DN87 165 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 NFYBP25208 207 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 HRH1P35367 487 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 FAUP35544 74 aaKnown RBP11.11□□□□□ -0.63
CDK9-204ENST00000491521 RFX2P48378 723 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 RAG2P55895 527 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 TSPAN5P62079 268 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
CDK9-204ENST00000491521 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 TCF23Q7RTU1 214 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 KIR3DL3Q8N743 410 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 OR10J5Q8NHC4 309 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 SSMEM1Q8WWF3 244 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 GINS4Q9BRT9 223 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 PRDM13Q9H4Q3 707 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 MCUBQ9NWR8 336 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 EHFQ9NZC4 300 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 SLC23A1Q9UHI7 598 aa11.11□□□□□ -0.63
CDK9-204ENST00000491521 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
CDK9-204ENST00000491521 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 IGHV3-43A0A0B4J1X8 118 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 DISC1C4P0D8 188 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 RNASEK-C17orf49H0YIS7 233 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 OR5H8P0DN80 308 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 IGHV3-43DP0DP04 118 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 ZBTB25P24278 435 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 CEACAM6P40199 344 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 ERVFRD-1P60508 538 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
CDK9-204ENST00000491521 DCTN2Q13561 401 aaKnown RBP11.1□□□□□ -0.63
CDK9-204ENST00000491521 MEF2DQ14814 521 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 STEAP3Q658P3 488 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 ZNF782Q6ZMW2 699 aaPredicted RBP11.1□□□□□ -0.63
CDK9-204ENST00000491521 TMEM17Q86X19 198 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 Q8N7P7 452 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 OR52L2PQ8NGH6 319 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 TINAGL1Q9GZM7 467 aaPredicted RBP11.1□□□□□ -0.63
CDK9-204ENST00000491521 HRASLSQ9HDD0 168 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 OR2S2Q9NQN1 319 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 C1RLQ9NZP8 487 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
CDK9-204ENST00000491521 NPIPB11E5RHQ5 1161 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 NPFFO15130 113 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 GPR137BO60478 399 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 AMY2AP04746 511 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 TBPP20226 339 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 DEFA1P59665 94 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 DEFA3P59666 94 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 HTD2P86397 168 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 RELBQ01201 579 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 IFITM3Q01628 133 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 DYRK1AQ13627 763 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 SCGB2B2Q4G0G5 96 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 FAAP20Q6NZ36 180 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 HEPN1Q6WQI6 88 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 OR10V1Q8NGI7 309 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 OR4C16Q8NGL9 310 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 OR6F1Q8NGZ6 308 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 OR4F5Q8NH21 305 aa11.09□□□□□ -0.63
CDK9-204ENST00000491521 OR56B4Q8NH76 319 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms