RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PLEKHG7Q6ZR37 379 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 SPATA12Q7Z6I5 190 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 SAXO1Q8IYX7 474 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 CACNG8Q8WXS5 425 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 MRPS24Q96EL2 167 aaKnown RBP8.44□□□□□ -1.06
HDAC6-233ENST00000489352 KCTD14Q9BQ13 255 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-233ENST00000489352 BTBD10Q9BSF8 475 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 CSTL1Q9H114 145 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 MRGBPQ9NV56 204 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF320A2RRD8 509 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 SRSF10O75494 262 aaKnown RBP8.43□□□□□ -1.06
HDAC6-233ENST00000489352 KRT36O76013 467 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 RPP14O95059 124 aaKnown RBP8.43□□□□□ -1.06
HDAC6-233ENST00000489352 CCNB2O95067 398 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF20P17024 532 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 ADMP35318 185 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 OR3A3P47888 321 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF322Q6U7Q0 402 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-233ENST00000489352 Q6ZTC4 211 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 CPOQ8IVL8 374 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 IQCF1Q8N6M8 205 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 AQP11Q8NBQ7 271 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF439Q8NDP4 499 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 GHSRQ92847 366 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 TMEM68Q96MH6 324 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 DPCDQ9BVM2 203 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-233ENST00000489352 MLXQ9UH92 298 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 ENOPH1Q9UHY7 261 aa8.43□□□□□ -1.06
HDAC6-233ENST00000489352 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 PRR32B1ATL7 298 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 TNFRSF11BO00300 401 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 AMBPP02760 352 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 CXCR4P61073 352 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 ATP5G2Q06055 141 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 EXOSC2Q13868 293 aaKnown RBP8.42□□□□□ -1.06
HDAC6-233ENST00000489352 TMEM30BQ3MIR4 351 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 GLYATQ6IB77 296 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 FAM131AQ6UXB0 335 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 SUMF2Q8NBJ7 301 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 UXS1Q8NBZ7 420 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 OR5B3Q8NH48 314 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 NEK7Q8TDX7 302 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 PYURFQ96I23 114 aa8.42□□□□□ -1.06
HDAC6-233ENST00000489352 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 IGKV1-9A0A0C4DH69 117 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 MAGEB4O15481 346 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-233ENST00000489352 GGCTO75223 188 aaKnown RBP8.41□□□□□ -1.06
HDAC6-233ENST00000489352 VSNL1P62760 191 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 BTNL8Q6UX41 500 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 UTS2BQ765I0 119 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF367Q7RTV3 350 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 STX19Q8N4C7 294 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 ADAD2Q8NCV1 583 aaKnown RBP8.41□□□□□ -1.06
HDAC6-233ENST00000489352 STON2Q8WXE9 905 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF503Q96F45 646 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 PHB2Q99623 299 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 ABHD14AQ9BUJ0 271 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 OR2S2Q9NQN1 319 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 MAGEL2Q9UJ55 1249 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 TRAPPC2LQ9UL33 140 aa8.41□□□□□ -1.06
HDAC6-233ENST00000489352 A0A0G2JND7 137 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 AIPO00170 330 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 NME4O00746 187 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 NDUFAB1O14561 156 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 RBBP9O75884 186 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 OR2C1O95371 312 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 FADS2O95864 444 aaKnown RBP8.4□□□□□ -1.06
HDAC6-233ENST00000489352 MC5RP33032 325 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 MAGOHP61326 146 aaKnown RBP8.4□□□□□ -1.06
HDAC6-233ENST00000489352 IL13RA2Q14627 380 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 FAM106AQ4KMX7 169 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 FAM209BQ5JX69 171 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 BBS1Q8NFJ9 593 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 FGGYQ96C11 551 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 ALG8Q9BVK2 526 aa8.4□□□□□ -1.06
HDAC6-233ENST00000489352 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
HDAC6-233ENST00000489352 FAM223BA6NKX1 122 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 PPP5D1E7EU14 171 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 ZNF670-ZNF695F2Z2N8 137 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 HLA-AP01891 365 aaKnown RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 HMGN1P05114 100 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 KRT8P05787 483 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 TMEM187Q14656 261 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 PSG5Q15238 335 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 MORN2Q502X0 79 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 C6orf183Q5T699 404 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 OR4A47Q6IF82 309 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 SERPINA12Q8IW75 414 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 FAM223AQ8IWN6 122 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 KCNG3Q8TAE7 436 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 CD300LFQ8TDQ1 290 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 DYDC1Q8WWB3 177 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 ADAT3Q96EY9 351 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 CNN2Q99439 309 aaKnown RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 TSNAXQ99598 290 aaKnown RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 SPAG8Q99932 426 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 RNF5Q99942 180 aa8.39□□□□□ -1.07
HDAC6-233ENST00000489352 HOPXQ9BPY8 73 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-233ENST00000489352 TEX12Q9BXU0 123 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms