RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 STEAP1BQ6NZ63 245 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 PLET1Q6UQ28 207 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 MOB1BQ7L9L4 216 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 HOGA1Q86XE5 327 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 OR11H6Q8NGC7 330 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 PIFOQ8TCI5 191 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 MRGPRDQ8TDS7 321 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 CCDC107Q8WV48 283 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 LEAP2Q969E1 77 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 SCGB3A2Q96PL1 93 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 TMEM133Q9H2Q1 129 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 DPAGT1Q9H3H5 408 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 ZNF286AQ9HBT8 521 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 TAS2R3Q9NYW6 316 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 KCNK7Q9Y2U2 307 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 TRRAPQ9Y4A5 3859 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 TRBV6-6A0A0A6YYG2 114 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 KBTBD11-OT1A0A1B0GTJ5 212 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 LINC00854A0A1B0GVQ3 168 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 hCG_1809904A0A1W2PP81 198 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 A0A1W2PPE2 198 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 A0A1W2PR64 198 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 A0A1W2PRV1 198 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 GPR137BO60478 399 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 RAB3DO95716 219 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 MT-ND4P03905 459 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 HKR1P10072 659 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 SSTR5P35346 364 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 RAB13P51153 203 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 ARPC4P59998 168 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 OXA1LQ15070 435 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 PLA1AQ53H76 456 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 FBLN7Q53RD9 439 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 RNASE12Q5GAN4 147 aaKnown RBP9.89□□□□□ -0.83
PTPRF-213ENST00000481019 OLFML2AQ68BL7 652 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 SLC35E4Q6ICL7 350 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 HEPN1Q6WQI6 88 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 ZNF497Q6ZNH5 498 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 Q6ZPA2 131 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 Q6ZS49 121 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 BEND2Q8NDZ0 799 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 BEST4Q8NFU0 473 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 OR13D1Q8NGV5 346 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 OR4K15Q8NH41 348 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 RFESDQ8TAC1 157 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 NUDCD2Q8WVJ2 157 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 SSMEM1Q8WWF3 244 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 PRRT1Q99946 306 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 SULT4A1Q9BR01 284 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 ST6GALNAC5Q9BVH7 336 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 NCOR1P1Q9H4R4 102 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 CALYQ9NYX4 217 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 C1RLQ9NZP8 487 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 AK3Q9UIJ7 227 aa9.89□□□□□ -0.83
PTPRF-213ENST00000481019 UBE2QL1A1L167 161 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 ZNF729A6NN14 1252 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-213ENST00000481019 NPIPB11E5RHQ5 1161 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 C15orf65H3BRN8 121 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 H3BUX3 64 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 PLA2G10O15496 165 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 LANCL1O43813 399 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 CD74P04233 296 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 ECI1P42126 302 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 COMPP49747 757 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-213ENST00000481019 LTC4SQ16873 150 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 AWAT1Q58HT5 328 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 TRAT1Q6PIZ9 186 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 ZNF554Q86TJ5 538 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 ABHD12Q8N2K0 398 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 ARRDC1Q8N5I2 433 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 OR5AP2Q8NGF4 316 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 OR4P4Q8NGL7 312 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 OR5H2Q8NGV7 314 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 GCDHQ92947 438 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-213ENST00000481019 KIRREL1Q96J84 757 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 SLC25A21Q9BQT8 299 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-213ENST00000481019 C11orf54Q9H0W9 315 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-213ENST00000481019 MEGF9Q9H1U4 602 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 GAL3ST2Q9H3Q3 398 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 LINC00574Q9H8X3 128 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 HRASLSQ9HDD0 168 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 MCUBQ9NWR8 336 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 KCNIP1Q9NZI2 227 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 OR6C3Q9NZP0 311 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 TBC1D24Q9ULP9 559 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 ANAPC10Q9UM13 185 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 POMT1Q9Y6A1 747 aa9.88□□□□□ -0.83
PTPRF-213ENST00000481019 TMEM30CPA0ZSE6 113 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 SSX5O60225 188 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 DIRAS3O95661 229 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 IGLV1-47P01700 117 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 CD3DP04234 171 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 FCER2P06734 321 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 PTHLHP12272 177 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 MDKP21741 143 aaPredicted RBP9.87□□□□□ -0.83
PTPRF-213ENST00000481019 NFYBP25208 207 aa9.87□□□□□ -0.83
PTPRF-213ENST00000481019 SLC6A1P30531 599 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms