RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 MMP28Q9H239 520 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 PATZ1Q9HBE1 687 aaKnown RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 OR2S2Q9NQN1 319 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 FAM212BQ9NTI7 297 aaPredicted RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 NUDT15Q9NV35 164 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ING3Q9NXR8 418 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 IL36RNQ9UBH0 155 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 CLN8Q9UBY8 286 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF69Q9UC07 566 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 CACFD1Q9UGQ2 172 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 KIF25Q9UIL4 384 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 JPT1Q9UK76 154 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 RBM7Q9Y580 266 aaKnown RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 YLPM1P49750 1951 aaKnown RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 TRAV6A0A075B6T7 132 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 IGHV3OR15-7A0A075B7D8 119 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 ELOA3CA0A087WX78 387 aaPredicted RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 C7orf66A4D0T2 115 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 GPR31O00270 319 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 HSPB6O14558 160 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 DVL1O14640 695 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 DUS4LO95620 317 aaKnown RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 PPYP01298 95 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 IGHV4-39P01824 125 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 SCTP09683 121 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CGB3P0DN86 165 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CGB7P0DN87 165 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 RCC1P18754 421 aaPredicted RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CD80P33681 288 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CDKN1AP38936 164 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 GLIPR1P48060 266 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 BCAP31P51572 246 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CCR6P51684 374 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 RND3P61587 244 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 TATDN3Q17R31 274 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 SPRNQ5BIV9 151 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 OXLD1Q5BKU9 147 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF660Q6AZW8 331 aaPredicted RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CLEC2AQ6UVW9 174 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 HEPN1Q6WQI6 88 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 RTN4RL2Q86UN3 420 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 H1FOOQ8IZA3 346 aaPredicted RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 OR10V1Q8NGI7 309 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 COQ8AQ8NI60 647 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 PLPPR1Q8TBJ4 325 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF431Q8TF32 576 aaPredicted RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 DYRK2Q92630 601 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 TNFRSF14Q92956 283 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 COQ2Q96H96 371 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 PHB2Q99623 299 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 AIFM2Q9BRQ8 373 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 HDHD3Q9BSH5 251 aaPredicted RBP5.81□□□□□ -1.48
SHQ1-207ENST00000475558 RSRP1Q9BUV0 290 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 C19orf24Q9BVV8 132 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 SUCNR1Q9BXA5 334 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 OR51J1Q9H342 316 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 ZFP57Q9NU63 452 aa5.81□□□□□ -1.48
SHQ1-207ENST00000475558 TEX13DA0A0J9YY54 714 aaPredicted RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 C12orf77C9JDV5 145 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 SDCBPO00560 298 aaPredicted RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ARPC1BO15143 372 aaKnown RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 BET1O15155 118 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 SSNA1O43805 119 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 SSX4O60224 188 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 FOXH1O75593 365 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 HBZP02008 142 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 OR4E1P0C645 316 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 RPS2P15880 293 aaKnown RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 RPA2P15927 270 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 SLC25A16P16260 332 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 HLA-GP17693 338 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 PRRX1P54821 245 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 GNB2P62879 340 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 LOXL1Q08397 574 aaPredicted RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ATXN7L3Q14CW9 347 aaPredicted RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 TMEM249Q2WGJ8 235 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ESCO2Q56NI9 601 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 AADACL3Q5VUY0 350 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF66Q6ZN08 573 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 BATF2Q8N1L9 274 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 BVESQ8NE79 360 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 OR4D10Q8NGI6 311 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 OR13C8Q8NGS7 320 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 C8orf46Q8TAG6 207 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 MRGPRDQ8TDS7 321 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 IL1F10Q8WWZ1 152 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 FAM168AQ92567 244 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 DACT3Q96B18 629 aaPredicted RBP5.8□□□□□ -1.48
SHQ1-207ENST00000475558 GALNT14Q96FL9 552 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ADTRPQ96IZ2 230 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF714Q96N38 554 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 PIMREGQ9BSJ6 248 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 DCTN5Q9BTE1 182 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 SLC5A7Q9GZV3 580 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 RDH8Q9NYR8 311 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 CALYQ9NYX4 217 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 IDI2-AS1Q9NZ38 188 aa5.8□□□□□ -1.48
SHQ1-207ENST00000475558 PIPOXQ9P0Z9 390 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms