RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 COL10A1Q03692 680 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SRSF4Q08170 494 aaKnown RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 EIF3IQ13347 325 aaKnown RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 PMCHL1Q16048 86 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF562Q6V9R5 426 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 CENPVQ7Z7K6 275 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 BIVMQ86UB2 503 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 UBE2DNLQ8IWF7 75 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 STPG3Q8N7X2 389 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 RARRES2Q99969 163 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 PHF7Q9BWX1 381 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 FGF20Q9NP95 211 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-210ENST00000471181 SLC17A5Q9NRA2 495 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 R4GN57 208 aa6.04□□□□□ -1.44
BRCA1-210ENST00000471181 CXorf65A6NEN9 183 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 H3BTX0 84 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 CCL21O00585 134 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MPZL1O95297 269 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 IGF2P01344 180 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 FOLR2P14207 255 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 HOXA5P20719 270 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MC5RP33032 325 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 HIST1H4AP62805 103 aaKnown RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MAFAQ8NHW3 353 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 ITLN2Q8WWU7 325 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MRPL24Q96A35 216 aaKnown RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 C18orf15Q96N68 181 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 SLC6A13Q9NSD5 602 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 COL2A1P02458 1487 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 CTXND1A0A1B0GTU2 59 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PGPA6NDG6 321 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 CDKN2AP42771 156 aaKnown RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 TNFSF10P50591 281 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM50BP56557 158 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 STARD6P59095 220 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PRICKLE4Q2TBC4 344 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A53Q5H9E4 307 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 WFDC5Q8TCV5 224 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MRAPQ8TCY5 172 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MS4A4AQ96JQ5 239 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF714Q96N38 554 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 WFIKKN1Q96NZ8 548 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 TNFSF14O43557 240 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 RPL27AP46776 148 aaKnown RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 SELENOTP62341 195 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 FAM159AQ6UWV7 190 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 DUX3Q96PT4 197 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 DERL1Q9BUN8 251 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 ZBP1Q9H171 429 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PXMP4Q9Y6I8 212 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 COX11Q9Y6N1 276 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 A0A1W2PQM1 296 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 NDUFB4O95168 129 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 CTLA4P16410 223 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 CCR5P51681 352 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 RPS20P60866 119 aaKnown RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PWWP2BQ6NUJ5 590 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 OR2Y1Q8NGV0 311 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PTP4A1Q93096 173 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PMCHL2Q9BQD1 86 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 KCNE5Q9UJ90 142 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 MPC1Q9Y5U8 109 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 IGHV3-66A0A0C4DH42 116 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 LOC390937A0A1W2PQ73 354 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 OR11H12B2RN74 326 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 ZBTB42B2RXF5 422 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 NDUFA3O95167 84 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 TRGC1P0CF51 173 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 GABRG2P18507 467 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 SNRPD3P62318 126 aaKnown RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 PQLC2Q6ZP29 291 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF784Q8NCA9 323 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-210ENST00000471181 OR11H1Q8NG94 326 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 OR11H2Q8NH07 326 aa6.03□□□□□ -1.44
BRCA1-210ENST00000471181 CFDP00746 253 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-210ENST00000471181 PAPPA-AS1Q5QFB9 102 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 RHNO1Q9BSD3 238 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 AKIP1Q9NQ31 210 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
BRCA1-210ENST00000471181 SLC25A15Q9Y619 301 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 NRXN2Q9P2S2 1712 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 A0A1W2PRX2 142 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 ASPDHA6ND91 283 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 MMP16P51512 607 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 ACER2Q5QJU3 275 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 GUSBP11Q6P575 273 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 FUNDC1Q8IVP5 155 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 OR8B12Q8NGG6 310 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 MVB12AQ96EY5 273 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 ST6GAL2Q96JF0 529 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 ZNF275Q9NSD4 429 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-210ENST00000471181 CBLN4Q9NTU7 201 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 FOXJ2Q9P0K8 574 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 FOXI3A8MTJ6 420 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-210ENST00000471181 ADRA2AP08913 450 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 VSIG10L2P0DP72 767 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 SPSB4Q96A44 273 aa6.02□□□□□ -1.45
BRCA1-210ENST00000471181 TUBD1Q9UJT1 453 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms