RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CENPVQ7Z7K6 275 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-205ENST00000469550 MRGPRGQ86SM5 289 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF664Q8N3J9 261 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 OR1P1Q8NH06 330 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 BORCS8Q96FH0 119 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 SNX22Q96L94 193 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 MRPL37Q9BZE1 423 aaKnown RBP8.18□□□□□ -1.1
HDAC3-205ENST00000469550 PPP1R14DQ9NXH3 145 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF581Q9P0T4 197 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 GNG13Q9P2W3 67 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 RNF115Q9Y4L5 304 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 CREBBPQ92793 2442 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 IGHV1-45A0A0A0MS14 117 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 IGHV3-20A0A0C4DH32 117 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 IGKV1-12A0A0C4DH73 117 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A10PA6NDY2 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A18PA6NE21 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A16PA6NEW6 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A20PA6NIJ5 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A8PA6NJQ4 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A7PA6NKC0 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A12PA8MX19 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A5PA8MXJ8 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A23PA8MXZ1 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 DHHO43323 396 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 CHST1O43916 411 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 VAMP5O95183 116 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 IGKV1D-12P01611 117 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A15PP0C7V4 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A13PP0C7W8 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A14PP0C7W9 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM90A24PP0C7X0 464 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 PAX9P55771 341 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 SNAI3Q3KNW1 292 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FAM27BQ5VT28 67 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 LINC00696Q6ZRV3 163 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 TECTBQ96PL2 329 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 CRLF2Q9HC73 371 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ABI3Q9P2A4 366 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ST3GAL6Q9Y274 331 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 DIDO1Q9BTC0 2240 aaKnown RBP8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ABCA12Q86UK0 2595 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 A0A1B0GWJ7 208 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 TK1P04183 234 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FUT6P51993 359 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ARG2P78540 354 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 MRPS34P82930 218 aaKnown RBP8.17□□□□□ -1.1
HDAC3-205ENST00000469550 SERF2P84101 59 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF154Q13106 437 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 SLC10A1Q14973 349 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 RAB35Q15286 201 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 PIGYQ3MUY2 71 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 PHYHD1Q5SRE7 291 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 Q6ZPA2 131 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 C5orf24Q7Z6I8 188 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 TGIF2LXQ8IUE1 241 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 C20orf196Q8IYI0 205 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 FADS6Q8N9I5 356 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 Q8NFD4 153 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 OR5D13Q8NGL4 314 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 DYRK2Q92630 601 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF845Q96IR2 970 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-205ENST00000469550 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 TAAR6Q96RI8 345 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 RAB40CQ96S21 281 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 MAGT1Q9H0U3 335 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 METTL7AQ9H8H3 244 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 PLEK2Q9NYT0 353 aa8.17□□□□□ -1.1
HDAC3-205ENST00000469550 ZG16O60844 167 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 NRASP01111 189 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 IFNA1P01562 189 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 OPN1LWP04000 364 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 RBM11P57052 281 aaKnown RBP8.16□□□□□ -1.1
HDAC3-205ENST00000469550 PCOLCEQ15113 449 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 WDR25Q64LD2 544 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-205ENST00000469550 CYP2G1PQ6ZSU1 146 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 THNSL2Q86YJ6 484 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 TMEM123Q8N131 208 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 TMEM217Q8N7C4 229 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 IMMP1LQ96LU5 166 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 PARD6GQ9BYG4 376 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-205ENST00000469550 RPRMQ9NS64 109 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 SLC7A10Q9NS82 523 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 DCAF16Q9NXF7 216 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 LRFN1Q9P244 771 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 NAT8Q9UHE5 227 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 CNTRLQ7Z7A1 2325 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 CELSR2Q9HCU4 2923 aa8.16□□□□□ -1.1
HDAC3-205ENST00000469550 TRBV11-1A0A0K0K1C0 115 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 FAM221AA4D161 298 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 H0Y980 276 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 TUSC2O75896 110 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 OR2J2O76002 312 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 ZFAND5O76080 213 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 WNT2P09544 360 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 CTXN2P0C2S0 81 aa8.15□□□□□ -1.1
HDAC3-205ENST00000469550 CCKARP32238 428 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms