RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CORO2AQ92828 525 aa15.71■□□□□ 0.11
SMC4-209ENST00000468653 KLF2Q9Y5W3 355 aaPredicted RBP15.71■□□□□ 0.11
SMC4-209ENST00000468653 MPTX1A8MV57 137 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 DVL1O14640 695 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 LY6HO94772 140 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 GOSR1O95249 250 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 IGLV2-14P01704 120 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 DAOP14920 347 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 F2RP25116 425 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 RPL31P62899 125 aaKnown RBP15.7■□□□□ 0.1
SMC4-209ENST00000468653 MRPS11P82912 194 aaKnown RBP15.7■□□□□ 0.1
SMC4-209ENST00000468653 MEF2CQ06413 473 aaPredicted RBP15.7■□□□□ 0.1
SMC4-209ENST00000468653 LRRC37A5PQ49AS3 106 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 GGNBP1Q5YKI7 109 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 TCF23Q7RTU1 214 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 DRAM1Q8N682 238 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 OR51H1Q8NH63 302 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 PPP1R1CQ8WVI7 109 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 EDARADDQ8WWZ3 215 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 H1FXQ92522 213 aaKnown RBP15.7■□□□□ 0.1
SMC4-209ENST00000468653 C2orf50Q96LR7 162 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 NMES1Q9C002 83 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 CTSZQ9UBR2 303 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 LINC00312Q9Y6C7 94 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 FXYD6-FXYD2A0A087WZ82 144 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 H0Y980 276 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 YPEL1O60688 119 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 FSTL3O95633 263 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 MORN2Q502X0 79 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 TMEM268Q5VZI3 342 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 ZNF695Q8IW36 515 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 ZBTB34Q8NCN2 500 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 C18orf12Q96KH6 178 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 OR10C1Q96KK4 312 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 YPEL2Q96QA6 119 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 PSG11Q9UQ72 335 aa15.7■□□□□ 0.1
SMC4-209ENST00000468653 ZNF462Q96JM2 2506 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 IGHV2-70P01814 119 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 LOXL3P58215 753 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 AVPI1Q5T686 147 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 LYZL2Q7Z4W2 148 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 TIMD4Q96H15 378 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 C19orf12Q9NSK7 152 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 TAS2R3Q9NYW6 316 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 GSKIPQ9P0R6 139 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 LPAR3Q9UBY5 353 aa15.69■□□□□ 0.1
SMC4-209ENST00000468653 TRAV14DV4A0A0A6YYC5 116 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 ST8SIA5O15466 376 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 FCN3O75636 299 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 B3GALNT1O75752 331 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 UCP1P25874 307 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 CDKN1AP38936 164 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 IAH1Q2TAA2 248 aaPredicted RBP15.68■□□□□ 0.1
SMC4-209ENST00000468653 LHFPL5Q8TAF8 219 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 RAB1CQ92928 201 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 GAL3ST2Q9H3Q3 398 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 GFOD1Q9NXC2 390 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 IDI2-AS1Q9NZ38 188 aa15.68■□□□□ 0.1
SMC4-209ENST00000468653 RNF212BA8MTL3 300 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 PPIHO43447 177 aaKnown RBP15.67■□□□□ 0.1
SMC4-209ENST00000468653 ZNF16P17020 682 aaPredicted RBP15.67■□□□□ 0.1
SMC4-209ENST00000468653 NFYBP25208 207 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 SLC35G3Q8N808 338 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 TMEM56Q96MV1 263 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 LINC00574Q9H8X3 128 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 TMEM56-RWDD3S4R434 201 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 DOPEY1Q5JWR5 2465 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 HMSDA8MTL9 139 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 SERPINE2P07093 398 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 PSMB6P28072 239 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 ZNF273Q14593 569 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 MSMO1Q15800 293 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 TMEM30BQ3MIR4 351 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 LGALSLQ3ZCW2 172 aaPredicted RBP15.67■□□□□ 0.1
SMC4-209ENST00000468653 TMEM200BQ69YZ2 307 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 C11orf87Q6NUJ2 197 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 SELENOHQ8IZQ5 122 aaKnown RBP15.67■□□□□ 0.1
SMC4-209ENST00000468653 THAP6Q8TBB0 222 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 FAM216AQ8WUB2 273 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 ABHD14BQ96IU4 210 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 SPOCK3Q9BQ16 436 aa15.67■□□□□ 0.1
SMC4-209ENST00000468653 DSCAML1Q8TD84 2053 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 ARPC5O15511 151 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 SNAPC5O75971 98 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 MPC2O95563 127 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 CDS2O95674 445 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 IGHV3-7P01780 117 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 WNT2P09544 360 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 ZBTB8BQ8NAP8 495 aaPredicted RBP15.66■□□□□ 0.1
SMC4-209ENST00000468653 ZNF714Q96N38 554 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 PLEKHF2Q9H8W4 249 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 CHODLQ9H9P2 273 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 LIN7CQ9NUP9 197 aaKnown RBP15.66■□□□□ 0.1
SMC4-209ENST00000468653 TMED3Q9Y3Q3 217 aa15.66■□□□□ 0.1
SMC4-209ENST00000468653 SLC25A4P12235 298 aa15.65■□□□□ 0.1
SMC4-209ENST00000468653 GPR12P47775 334 aa15.65■□□□□ 0.1
SMC4-209ENST00000468653 PRAMEF5Q5TYX0 476 aa15.65■□□□□ 0.1
SMC4-209ENST00000468653 RBPMSQ93062 196 aaKnown RBP15.65■□□□□ 0.1
SMC4-209ENST00000468653 IL22RA2Q969J5 263 aa15.65■□□□□ 0.1
SMC4-209ENST00000468653 AGMATQ9BSE5 352 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms