RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 GPR4P46093 362 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 BCAP31P51572 246 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 CTAG1AP78358 180 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 RIGQ13278 110 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 COTL1Q14019 142 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 IZUMO4Q1ZYL8 232 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 KIAA1644Q3SXP7 199 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 LINC01620Q4KN68 170 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 SSX7Q7RTT5 188 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 TCF23Q7RTU1 214 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 CYP4Z1Q86W10 505 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 OR10G8Q8NGN5 311 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 OR6X1Q8NH79 312 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 TCP10LQ8TDR4 215 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 C16orf78Q8WTQ4 265 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 SPRYD4Q8WW59 207 aaPredicted RBP3.25□□□□□ -1.89
HMGB1-207ENST00000468384 ZNF486Q96H40 463 aaPredicted RBP3.25□□□□□ -1.89
HMGB1-207ENST00000468384 RASL11BQ9BPW5 248 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 CHST5Q9GZS9 411 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 RGCCQ9H4X1 137 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 WDR55Q9H6Y2 383 aaPredicted RBP3.25□□□□□ -1.89
HMGB1-207ENST00000468384 TREM1Q9NP99 234 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 TAS2R7Q9NYW3 318 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 TBC1D24Q9ULP9 559 aa3.25□□□□□ -1.89
HMGB1-207ENST00000468384 AMMECR1Q9Y4X0 333 aaPredicted RBP3.25□□□□□ -1.89
HMGB1-207ENST00000468384 IGKV1D-17A0A075B6S4 117 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 GNG14A0A1W2PPG7 69 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 SNTNA6NMZ2 147 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 OR2AT4A6NND4 320 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 C12orf71A8MTZ7 269 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 H3BTX0 84 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 ZNF701M0R085 212 aaPredicted RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 FAAHO00519 579 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 LSM1O15116 133 aaKnown RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 TYROBPO43914 113 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 S1PR2O95136 353 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 NXPH2O95156 264 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 C1QCP02747 245 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 STAG3L2P0CL84 134 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 TROVE2P10155 538 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 COX5BP10606 129 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 HTN3P15516 51 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 NQO1P15559 274 aaKnown RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 ID1P41134 155 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 HTR2BP41595 481 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 PLTPP55058 493 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 SGCAQ16586 387 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 RFTN2Q52LD8 501 aaPredicted RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 DMKNQ6E0U4 476 aaPredicted RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 RNASEKQ6P5S7 137 aaKnown RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 KCNIP4Q6PIL6 250 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 ZNF562Q6V9R5 426 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 ZNF676Q8N7Q3 588 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 ASCC1Q8N9N2 400 aaKnown RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 HSD17B11Q8NBQ5 300 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 OR5AP2Q8NGF4 316 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 OR4D10Q8NGI6 311 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 OR5B3Q8NH48 314 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 ZNF596Q8TC21 504 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 CD300LFQ8TDQ1 290 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 MITD1Q8WV92 249 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 NUDCD2Q8WVJ2 157 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 SGTBQ96EQ0 304 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 C7orf34Q96L11 122 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 PRRC1Q96M27 445 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 SDF2Q99470 211 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 PAXXQ9BUH6 204 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 MRPL22Q9NWU5 206 aaKnown RBP3.24□□□□□ -1.89
HMGB1-207ENST00000468384 RHBDD3Q9Y3P4 386 aa3.24□□□□□ -1.89
HMGB1-207ENST00000468384 A0A087WUJ7 227 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 A0A096LPI6 279 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 A0A1W2PRG6 482 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 BUB1B-PAK6H3BSN5 160 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 NBR2O15453 112 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 MPZL2O60487 215 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 KHDRBS3O75525 346 aaKnown RBP3.23□□□□□ -1.89
HMGB1-207ENST00000468384 CA1P00915 261 aaPredicted RBP3.23□□□□□ -1.89
HMGB1-207ENST00000468384 MBP02144 154 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 CRYGBP07316 175 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 GSTT2P0CG29 244 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 GSTT2BP0CG30 244 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 DBTP11182 482 aaKnown RBP3.23□□□□□ -1.89
HMGB1-207ENST00000468384 FOLR2P14207 255 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 MSR1P21757 451 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 LAP3P28838 519 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 GPR183P32249 361 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 PCBD1P61457 104 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 ARL16Q0P5N6 197 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 SYPL1Q16563 259 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 FAM83EQ2M2I3 478 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 ZNF829Q3KNS6 432 aaPredicted RBP3.23□□□□□ -1.89
HMGB1-207ENST00000468384 GGTA1PQ4G0N0 100 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 PLCXD3Q63HM9 321 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 OLIG3Q7RTU3 272 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 DPY19L4Q7Z388 723 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 OR1L6Q8NGR2 347 aa3.23□□□□□ -1.89
HMGB1-207ENST00000468384 OR1L4Q8NGR5 311 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms