RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GIPC3Q8TF64 312 aa7.59□□□□□ -1.19
HDAC3-203ENST00000467533 MRPS24Q96EL2 167 aaKnown RBP7.59□□□□□ -1.19
HDAC3-203ENST00000467533 FAM192AQ9GZU8 254 aa7.59□□□□□ -1.19
HDAC3-203ENST00000467533 PARP12Q9H0J9 701 aaKnown RBP7.59□□□□□ -1.19
HDAC3-203ENST00000467533 ADGRL4Q9HBW9 690 aa7.59□□□□□ -1.19
HDAC3-203ENST00000467533 SCRT2Q9NQ03 307 aa7.59□□□□□ -1.19
HDAC3-203ENST00000467533 TVP23BQ9NYZ1 205 aa7.59□□□□□ -1.19
HDAC3-203ENST00000467533 ING4Q9UNL4 249 aa7.59□□□□□ -1.19
HDAC3-203ENST00000467533 SAA2-SAA4A0A096LPE2 208 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 METTL15A6NJ78 407 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 C16orf90A8MZG2 172 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 BMPR1BO00238 502 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 SLC22A1O15245 554 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 SCAF4O95104 1147 aaKnown RBP7.58□□□□□ -1.2
HDAC3-203ENST00000467533 HBZP02008 142 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 SAA2P0DJI9 122 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-203ENST00000467533 OSMP13725 252 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 OR3A3P47888 321 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 RPS16P62249 146 aaKnown RBP7.58□□□□□ -1.2
HDAC3-203ENST00000467533 ALKBH1Q13686 389 aaKnown RBP7.58□□□□□ -1.2
HDAC3-203ENST00000467533 GNMTQ14749 295 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 RSU1Q15404 277 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 KISS1Q15726 138 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 TM4SF20Q53R12 229 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 ATAD3CQ5T2N8 411 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 ZNF691Q5VV52 312 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 TMEM244Q5VVB8 128 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 STEAP3Q658P3 488 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 CGB2Q6NT52 195 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 ZNF833PQ6ZTB9 187 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 FAM220AQ7Z4H9 259 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 ODF3L1Q8IXM7 274 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 STX19Q8N4C7 294 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 OR13C3Q8NGS6 347 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 CACNG8Q8WXS5 425 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 THRSPQ92748 146 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 TINAGL1Q9GZM7 467 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-203ENST00000467533 FGFR1OP2Q9NVK5 253 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 COA4Q9NYJ1 87 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 TRAPPC2LQ9UL33 140 aa7.58□□□□□ -1.2
HDAC3-203ENST00000467533 H7C2Y5 167 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 SHOXO15266 292 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 HTR3BO95264 441 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 HSD17B1P14061 328 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 LGALS7P47929 136 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 MFAP2P55001 183 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 EXOSC2Q13868 293 aaKnown RBP7.57□□□□□ -1.2
HDAC3-203ENST00000467533 FXYD3Q14802 87 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 C6orf183Q5T699 404 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 ZNF57Q68EA5 555 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-203ENST00000467533 CYP2R1Q6VVX0 501 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 ZNF497Q6ZNH5 498 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 BCDIN3DQ7Z5W3 292 aaKnown RBP7.57□□□□□ -1.2
HDAC3-203ENST00000467533 PXT1Q8NFP0 134 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 TNFAIP8L1Q8WVP5 186 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 GHSRQ92847 366 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 USMG5Q96IX5 58 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 GPER1Q99527 375 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 ZNF556Q9HAH1 456 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 OR2S2Q9NQN1 319 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 RCC2Q9P258 522 aaKnown RBP7.57□□□□□ -1.2
HDAC3-203ENST00000467533 ENOPH1Q9UHY7 261 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 GNG8Q9UK08 70 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 ST3GAL6Q9Y274 331 aa7.57□□□□□ -1.2
HDAC3-203ENST00000467533 FADS2O95864 444 aaKnown RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 MT-ND4P03905 459 aa7.56□□□□□ -1.2
HDAC3-203ENST00000467533 RPL35AP18077 110 aaKnown RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 FCGR2BP31994 310 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 PPP1CCP36873 323 aaKnown RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 ADARB1P78563 741 aaKnown RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 MORN2Q502X0 79 aa7.56□□□□□ -1.2
HDAC3-203ENST00000467533 C6orf141Q5SZD1 244 aa7.56□□□□□ -1.2
HDAC3-203ENST00000467533 SYT6Q5T7P8 510 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 GLDNQ6ZMI3 551 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 OR51A4Q8NGJ6 313 aa7.56□□□□□ -1.2
HDAC3-203ENST00000467533 OR4K15Q8NH41 348 aa7.56□□□□□ -1.2
HDAC3-203ENST00000467533 CPNE2Q96FN4 548 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 C11orf68Q9H3H3 251 aaKnown RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 IFT22Q9H7X7 185 aa7.56□□□□□ -1.2
HDAC3-203ENST00000467533 H2AFY2Q9P0M6 372 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-203ENST00000467533 KIR2DL5BA0A0G2JN68 375 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 KIR2DL5BA0A0G2JPC4 375 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 A0A1W2PQL4 384 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-203ENST00000467533 OR5H14A6NHG9 310 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 C11orf94C9JXX5 98 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 GABRPO00591 440 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 GEMIN2O14893 280 aaKnown RBP7.55□□□□□ -1.2
HDAC3-203ENST00000467533 SULT1B1O43704 296 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 PRKYO43930 277 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 RBBP9O75884 186 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 SULT1C4O75897 302 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 ATP6V1B2P21281 511 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 RBM11P57052 281 aaKnown RBP7.55□□□□□ -1.2
HDAC3-203ENST00000467533 PSG5Q15238 335 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 TP53I3Q53FA7 332 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 TRAT1Q6PIZ9 186 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 KIR2DL5AQ8N109 375 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 OR10H4Q8NGA5 316 aa7.55□□□□□ -1.2
HDAC3-203ENST00000467533 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms