RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 COX5BP10606 129 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 OR10J1P30954 320 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 B3GALT5-AS1P59052 145 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 CEACAM16Q2WEN9 425 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 CEACAM21Q3KPI0 293 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 MRPL14Q6P1L8 145 aaKnown RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 TEX38Q6PEX7 206 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 ZDHHC23Q8IYP9 409 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 SLC25A45Q8N413 288 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 OR56B2PQ8NGI1 322 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 FGFBP3Q8TAT2 258 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 TMEM37Q8WXS4 190 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 NEIL1Q96FI4 390 aaPredicted RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 RBM14Q96PK6 669 aaKnown RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 ALKBH3Q96Q83 286 aaPredicted RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 GPR35Q9HC97 309 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 TMEM9BQ9NQ34 198 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 LIN7CQ9NUP9 197 aaKnown RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 MLNRO43193 412 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 CBR3O75828 277 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 MYF5P13349 255 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 NTF4P34130 210 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 RPL15P61313 204 aaKnown RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 CCL7P80098 99 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 DCAF10Q5QP82 559 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 ACSM6Q6P461 480 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 BTNL3Q6UXE8 466 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 MOB1BQ7L9L4 216 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 TMEM144Q7Z5S9 345 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 BATF2Q8N1L9 274 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 TMEM147Q9BVK8 224 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 UBE2ZQ9H832 354 aaPredicted RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 WDR54Q9H977 334 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 MTCH1Q9NZJ7 389 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 NAGKQ9UJ70 344 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 POLR3KQ9Y2Y1 108 aaPredicted RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 C2CD4DB7Z1M9 353 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 TMPRSS2O15393 492 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 IGLV2-14P01704 120 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 SRD5A2P31213 254 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 SSR4P51571 173 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 LBX1P52954 281 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 CASP6P55212 293 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 UBE2NP61088 152 aaKnown RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 GNB2P62879 340 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 GAGE1Q13065 139 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 RTP5Q14D33 572 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 IZUMO4Q1ZYL8 232 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 ZNF585BQ52M93 769 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 SPANXN5Q5MJ07 72 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 ZNF468Q5VIY5 522 aaPredicted RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 GGNQ86UU5 652 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 OR4F5Q8NH21 305 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 PSMF1Q92530 271 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 TMEM45BQ96B21 275 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 OR4F4Q96R69 305 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 CHODLQ9H9P2 273 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 CBLN4Q9NTU7 201 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 IL36RNQ9UBH0 155 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 WNT16Q9UBV4 365 aa6.19□□□□□ -1.42
USP48-206ENST00000464577 ERRFI1Q9UJM3 462 aaPredicted RBP6.19□□□□□ -1.42
USP48-206ENST00000464577 IGHV1-45A0A0A0MS14 117 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 TRAV24A0A0B4J272 114 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 SS18L1O75177 396 aaPredicted RBP6.18□□□□□ -1.42
USP48-206ENST00000464577 SERPINA7P05543 415 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 COX5AP20674 150 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 IL3RAP26951 378 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 GPM6AP51674 278 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 CARD18P57730 90 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 PPP1CBP62140 327 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 TESK1Q15569 626 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 TMEM249Q2WGJ8 235 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 TMEM164Q5U3C3 297 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 C20orf204Q6ZNR8 217 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 CPEB3Q8NE35 698 aaKnown RBP6.18□□□□□ -1.42
USP48-206ENST00000464577 OR5A2Q8NGI9 324 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 OR10G9Q8NGN4 311 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 OR10G7Q8NGN6 311 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 WDYHV1Q96HA8 205 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 IMMP1LQ96LU5 166 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 ATG101Q9BSB4 218 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 SLC25A22Q9H936 323 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 PXMP4Q9Y6I8 212 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 TNRC6AQ8NDV7 1962 aaKnown RBP6.18□□□□□ -1.42
USP48-206ENST00000464577 KIAA0100Q14667 2235 aaKnown RBP6.18□□□□□ -1.42
USP48-206ENST00000464577 MARCH11A6NNE9 402 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 RNF212BA8MTL3 300 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 HSPB6O14558 160 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 PDE6DO43924 150 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 CELA2AP08217 269 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 SFTPCP11686 197 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 COX6A1P12074 109 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 LTBRP36941 435 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 FOXL1Q12952 345 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 VWC2Q2TAL6 325 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 FAM180AQ6UWF9 173 aa6.18□□□□□ -1.42
USP48-206ENST00000464577 MRPL21Q7Z2W9 205 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 302.1 ms