RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ALX4Q9H161 411 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 BEX1Q9HBH7 125 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 C19orf12Q9NSK7 152 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 RDH8Q9NYR8 311 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 GPR132Q9UNW8 380 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 VSIG4Q9Y279 399 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 YLPM1P49750 1951 aaKnown RBP12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 IGHV4-61A0A0C4DH41 118 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 F2RL2O00254 374 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 TUSC2O75896 110 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 IL5P05113 134 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 CTSDP07339 412 aaPredicted RBP12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 MECP2P51608 486 aaKnown RBP12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 BAMBIQ13145 260 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 LTC4SQ16873 150 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 ZNF841Q6ZN19 808 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 SECTM1Q8WVN6 248 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 MRGPRFQ96AM1 343 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 ZNF486Q96H40 463 aaPredicted RBP12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 BPESC1Q9GZL8 116 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 FXYD6Q9H0Q3 95 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
TMEM39A-203ENST00000461654 hCG_1809904A0A1W2PP81 198 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 A0A1W2PR64 198 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 A0A1W2PRV1 198 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 CGB3P0DN86 165 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 CGB7P0DN87 165 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 AKR1C4P17516 323 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 UBE2MP61081 183 aaKnown RBP12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 CBX3Q13185 183 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 C17orf58Q2M2W7 97 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 SLC25A42Q86VD7 318 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 OR10V1Q8NGI7 309 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 OR52M1Q8NGK5 317 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 LINC00574Q9H8X3 128 aa12.5□□□□□ -0.41
TMEM39A-203ENST00000461654 LOC105371242A0A075B767 164 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 IGHV3-43A0A0B4J1X8 118 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 PPIAL4CA0A0B4J2A2 164 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 CREBL2O60519 120 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 YPEL1O60688 119 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 IFNA2P01563 188 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 IGHV2-5P01817 119 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 LIPFP07098 398 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 OR4E1P0C645 316 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 FAM157CP0CG43 387 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 PPIAL4GP0DN37 164 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 IGHV3-43DP0DP04 118 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 NFYBP25208 207 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 PPP1CCP36873 323 aaKnown RBP12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 BCAP31P51572 246 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 ZNF273Q14593 569 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 GLDNQ6ZMI3 551 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 C1orf159Q96HA4 380 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 YPEL2Q96QA6 119 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 MDFIQ99750 246 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 TOLLIPQ9H0E2 274 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 GFOD1Q9NXC2 390 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 RPUSD1Q9UJJ7 312 aaKnown RBP12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 KCNS2Q9ULS6 477 aa12.49□□□□□ -0.41
TMEM39A-203ENST00000461654 A0A0A6YYJ9 748 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 TEX13DA0A0J9YY54 714 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 C7orf66A4D0T2 115 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 GPR31O00270 319 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 SSNA1O43805 119 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 FCN3O75636 299 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 SLC22A5O76082 557 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 OR8U9P0C7N5 309 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 PI3P19957 117 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 OMGP23515 440 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 VAMP1P23763 118 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 TMEM128Q5BJH2 165 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 SGPP2Q8IWX5 399 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 OR2AK2Q8NG84 335 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 OR8U1Q8NH10 309 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 CLDND2Q8NHS1 167 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 C8orf46Q8TAG6 207 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 C5orf66Q9H5L9 145 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 KCNIP3Q9Y2W7 256 aa12.48□□□□□ -0.41
TMEM39A-203ENST00000461654 JMJD1CQ15652 2540 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 A0A0B4J293 547 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 HSD17B6O14756 317 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms