RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 OPCMLQ14982 345 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 C2orf68Q2NKX9 166 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ARFGEF3Q5TH69 2177 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 DMRTA1Q5VZB9 504 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 C11orf71Q6IPW1 123 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 EIF5AL1Q6IS14 154 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 ALKBH2Q6NS38 261 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 TEX261Q6UWH6 196 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 TMUB2Q71RG4 321 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 SELENOHQ8IZQ5 122 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 LINC00311Q8N616 119 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 STOML3Q8TAV4 291 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 GFOD1Q9NXC2 390 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 CALYQ9NYX4 217 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 MIOXQ9UGB7 285 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 MMP24Q9Y5R2 645 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 U3KQ87 197 aa5.69□□□□□ -1.5
ECHDC1-210ENST00000454859 LAMA5O15230 3695 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 CACNA1BQ00975 2339 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 EPG5Q9HCE0 2579 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A087X0M5 115 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 IGKV1D-13A0A0B4J2D9 117 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A1B0GX30 115 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 KANTRA0A1W2PQU2 76 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 B8ZZF3 427 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 MED6O75586 246 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 DEDDO75618 318 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 GAPDHP04406 335 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 IGKV1-13P0DP09 117 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 RRASP10301 218 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 P2RY1P47900 373 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 GLIPR1P48060 266 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 TMEM33P57088 247 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 GNMTQ14749 295 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 IAH1Q2TAA2 248 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 MORN2Q502X0 79 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 NMSQ5H8A3 153 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 DHRS7BQ6IAN0 325 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 HEPN1Q6WQI6 88 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 NCCRP1Q6ZVX7 275 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 C8orf46Q8TAG6 207 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 LINC01560Q8TB33 94 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 IL1F10Q8WWZ1 152 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 RAB1CQ92928 201 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 ZDHHC16Q969W1 377 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 WDR89Q96FK6 387 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 OR2S2Q9NQN1 319 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 CCL28Q9NRJ3 127 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 MED9Q9NWA0 146 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 IDI2-AS1Q9NZ38 188 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 RBM7Q9Y580 266 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 POMT1Q9Y6A1 747 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 SPTA1P02549 2419 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 C13orf42A0A1B0GVH6 325 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 hCG_1809904A0A1W2PP81 198 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A1W2PPE2 198 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A1W2PR64 198 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 A0A1W2PRV1 198 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 ST8SIA5O15466 376 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 BCL2L11O43521 198 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 GPR137BO60478 399 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 PI3P19957 117 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 CD80P33681 288 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 LOXL3P58215 753 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 CCL8P80075 99 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 PHLDA2Q53GA4 152 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 DRAM1Q8N682 238 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 OR4D5Q8NGN0 318 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 OR13A1Q8NGR1 328 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 MRGPRDQ8TDS7 321 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 RAB40CQ96S21 281 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 ARPC5LQ9BPX5 153 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 AGMATQ9BSE5 352 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 SLC25A31Q9H0C2 315 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 HEXA-AS1Q9H8Q6 139 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 SLC25A10Q9UBX3 287 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 UBQLN2Q9UHD9 624 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 RPUSD1Q9UJJ7 312 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 PRELID3BQ9Y3B1 194 aa5.68□□□□□ -1.5
ECHDC1-210ENST00000454859 PCNX1Q96RV3 2341 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 FXYD6-FXYD2A0A087WZ82 144 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 FAM25EA8MYX2 175 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 RAB29O14966 203 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 PITX3O75364 302 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 THBS3P49746 956 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 ATP5IP56385 69 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 RAB14P61106 215 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 BAXQ07812 192 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 AARDQ4LEZ3 155 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 TMEM268Q5VZI3 342 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 OR1L1Q8NH94 360 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 TP53RKQ96S44 253 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 RNF126Q9BV68 326 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 OR1A1Q9P1Q5 309 aa5.67□□□□□ -1.5
ECHDC1-210ENST00000454859 ARPC5O15511 151 aa5.66□□□□□ -1.5
ECHDC1-210ENST00000454859 SIX6O95475 246 aa5.66□□□□□ -1.5
ECHDC1-210ENST00000454859 CYB5R3P00387 301 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-210ENST00000454859 IGLV2-14P01704 120 aa5.66□□□□□ -1.5
ECHDC1-210ENST00000454859 IGHV2-70P01814 119 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms