RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 BPIFB3P59826 476 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 GNMTQ14749 295 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 SURF2Q15527 256 aaPredicted RBP9.18□□□□□ -0.94
TRAF4-206ENST00000454852 AADACL3Q5VUY0 350 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF626Q68DY1 528 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 SLC25A48Q6ZT89 311 aaKnown RBP9.18□□□□□ -0.94
TRAF4-206ENST00000454852 TEX29Q8N6K0 151 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 TERB2Q8NHR7 220 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 UBALD1Q8TB05 177 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 MOB3AQ96BX8 217 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 GINS4Q9BRT9 223 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 CLEC7AQ9BXN2 247 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 C11orf54Q9H0W9 315 aaPredicted RBP9.18□□□□□ -0.94
TRAF4-206ENST00000454852 C7orf69Q9H7B7 122 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 TMEM160Q9NX00 188 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF69Q9UC07 566 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 PSG11Q9UQ72 335 aa9.18□□□□□ -0.94
TRAF4-206ENST00000454852 IGHV3-43A0A0B4J1X8 118 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 RNASEK-C17orf49H0YIS7 233 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 J3QR06 171 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 LYRM1O43325 122 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 PPYP01298 95 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 IGHV3-43DP0DP04 118 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
TRAF4-206ENST00000454852 PPP1CCP36873 323 aaKnown RBP9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF134P52741 427 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 DEFA1P59665 94 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 DEFA3P59666 94 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 TSPAN5P62079 268 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 CT45A1Q5HYN5 189 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 UTF1Q5T230 341 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF782Q6ZMW2 699 aaPredicted RBP9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ABHD12Q8N2K0 398 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 OR2AK2Q8NG84 335 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 OR56B4Q8NH76 319 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 CT45A3Q8NHU0 189 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF2Q9BSG1 426 aaPredicted RBP9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ABHD14AQ9BUJ0 271 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 SUCNR1Q9BXA5 334 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 IFI27L2Q9H2X8 130 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 SIRT7Q9NRC8 400 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 SCP2D1Q9UJQ7 156 aa9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ANK3Q12955 4377 aaKnown RBP9.17□□□□□ -0.94
TRAF4-206ENST00000454852 ABCA1O95477 2261 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 CENPVL3A0A0U1RRI6 287 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 OR5H14A6NHG9 310 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 SMAD7O15105 426 aaKnown RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 SLC22A5O76082 557 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 AVPP01185 164 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 AADACP22760 399 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 NFYAP23511 347 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 NFYBP25208 207 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 SLC6A1P30531 599 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 LUMP51884 338 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 PRRX1P54821 245 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 HLA-DRB5Q30154 266 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 MIDNQ504T8 468 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 FAM53AQ6NSI3 398 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 FAM71F2Q6NXP2 309 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 FAAP20Q6NZ36 180 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 FAHD2BQ6P2I3 314 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 LDLRAD3Q86YD5 345 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 OR10V1Q8NGI7 309 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 OR51S1Q8NGJ8 323 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 OR4P4Q8NGL7 312 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 OR13C8Q8NGS7 320 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 MRGPRFQ96AM1 343 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 CREB3L1Q96BA8 519 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 FAHD2AQ96GK7 314 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 SLC25A21Q9BQT8 299 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 PCGF1Q9BSM1 259 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
TRAF4-206ENST00000454852 MMP28Q9H239 520 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 PIPOXQ9P0Z9 390 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 KCNS2Q9ULS6 477 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 WNK2Q9Y3S1 2297 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
TRAF4-206ENST00000454852 IGKV1D-13A0A0B4J2D9 117 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 LY6LH3BQJ8 138 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 SLC31A2O15432 143 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 IGLV2-14P01704 120 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 IGKV1-13P0DP09 117 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 CD99P14209 185 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 LTC4SQ16873 150 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 PLA1AQ53H76 456 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 MINOS1Q5TGZ0 78 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 MZT2BQ6NZ67 158 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 LPCAT3Q6P1A2 487 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 IDO2Q6ZQW0 420 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 C9orf139Q6ZV77 190 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 ODF3L1Q8IXM7 274 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 PNKDQ8N490 385 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 ZBTB34Q8NCN2 500 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 DUSP18Q8NEJ0 188 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 ST6GALNAC6Q969X2 333 aa9.15□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF486Q96H40 463 aaPredicted RBP9.15□□□□□ -0.94
TRAF4-206ENST00000454852 AKR1E2Q96JD6 320 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms