RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 HLA-DRB3P79483 266 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CEACAM21Q3KPI0 293 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CALHM1Q8IU99 346 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 GAPTQ8N292 157 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
LINC00343-203ENST00000454555 SLAMF9Q96A28 289 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CISD1Q9NZ45 108 aaKnown RBP11.28□□□□□ -0.6
LINC00343-203ENST00000454555 RNF115Q9Y4L5 304 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 IGSF10Q6WRI0 2623 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 DNAJC13O75165 2243 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 NPIPB11E5RHQ5 1161 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CNOT4O95628 575 aaKnown RBP11.28□□□□□ -0.6
LINC00343-203ENST00000454555 GLI4P10075 376 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 F2RP25116 425 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CD200P41217 278 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 RND2P52198 227 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 SERF2P84101 59 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 DAZAP2Q15038 168 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CXorf66Q5JRM2 361 aaPredicted RBP11.28□□□□□ -0.6
LINC00343-203ENST00000454555 C1orf185Q5T7R7 199 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 ZDHHC23Q8IYP9 409 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 OR5A2Q8NGI9 324 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 TRIB1Q96RU8 372 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 CTDSP1Q9GZU7 261 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 TINAGQ9UJW2 476 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 FAM215AQ9Y5M1 114 aa11.28□□□□□ -0.6
LINC00343-203ENST00000454555 IGKV3D-15A0A087WSY6 115 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-203ENST00000454555 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 TRAPPC2LH3BP13 241 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 DEGS1O15121 323 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 CHST1O43916 411 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 ZNF205O95201 554 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 IFNA1P01562 189 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 CASP6P55212 293 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 CCL20P78556 96 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 ZNF674Q2M3X9 581 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-203ENST00000454555 Q8WTZ3 238 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-203ENST00000454555 PINX1Q96BK5 328 aaKnown RBP11.27□□□□□ -0.61
LINC00343-203ENST00000454555 CABLES2Q9BTV7 478 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 PRRG4Q9BZD6 226 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 GP6Q9HCN6 339 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 DOK5Q9P104 306 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
LINC00343-203ENST00000454555 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 SHANK1Q9Y566 2161 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 PGLYRP1O75594 196 aaPredicted RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 CYB5R3P00387 301 aaPredicted RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 OMGP23515 440 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 TIMP3P35625 211 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 CA7P43166 264 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 HBG1P69891 147 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 HBG2P69892 147 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 NKX6-1P78426 367 aaPredicted RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 PRDX4Q13162 271 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 HAGHQ16775 308 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 ODF3L1Q8IXM7 274 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 NOSIPQ9Y314 301 aaKnown RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 OR2W1Q9Y3N9 320 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 CLDN34H7C241 214 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 PPP1R2P9O14990 202 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 BCL3P20749 454 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 NTF4P34130 210 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 MDH2P40926 338 aaKnown RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 MRPL49Q13405 166 aaKnown RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 NCMAPQ5T1S8 102 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 SLC25A24Q6NUK1 477 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 MRPL21Q7Z2W9 205 aaKnown RBP11.26□□□□□ -0.61
LINC00343-203ENST00000454555 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 VKORC1Q9BQB6 163 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 TAAR3PQ9P1P4 343 aa11.26□□□□□ -0.61
LINC00343-203ENST00000454555 TRGV8A0A0C4DH27 118 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 A0A1B0GV50 99 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 FAM90A26D6RGX4 464 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 H0YL77 283 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 SS18L1O75177 396 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-203ENST00000454555 CST7O76096 145 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 OPN1MWP04001 364 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 SERPINE2P07093 398 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 SCTP09683 121 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 OPN1MW2P0DN77 364 aa11.25□□□□□ -0.61
LINC00343-203ENST00000454555 OPN1MW3P0DN78 364 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms