RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TRAV36DV7A0A075B6V5 113 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 hCG_1818297A0A087WSY0 165 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 TRAV8-1A0A0A6YYK1 113 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 A0A1B0GX51 115 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 A8MT66 165 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 SHISA9B4DS77 424 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHG2P01859 326 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 HLA-DRB1P01911 266 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 CD48P09326 243 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 METTL15P1P0C7V9 234 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHV3-43DP0DP04 118 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 ORM2P19652 201 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 COX7A1P24310 79 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 VEGFCP49767 419 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 AKR1D1P51857 326 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 SYNJ2BPP57105 145 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPS20P60866 119 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 FABP9Q0Z7S8 132 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 DAZ2Q13117 558 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 BTN1A1Q13410 526 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 RNF212Q495C1 297 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 LRRC10Q5BKY1 277 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF613Q6PF04 617 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 SBSNQ6UWP8 590 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 Q6ZRU5 148 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 H2AFVQ71UI9 128 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 DAZ4Q86SG3 579 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 KLHDC8BQ8IXV7 354 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 LY6G5BQ8NDX9 201 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR1L1Q8NH94 360 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 C14orf144Q96I85 54 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 GPR82Q96P67 336 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 TMEM243Q9BU79 118 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 CHST6Q9GZX3 395 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZBP1Q9H171 429 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 OR52D1Q9H346 318 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 CDC42EP4Q9H3Q1 356 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 SLC25A22Q9H936 323 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 CACYBPQ9HB71 228 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 DAZ1Q9NQZ3 744 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 DAZ3Q9NR90 486 aaKnown RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 LINC00527Q9UJ94 153 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 FIS1Q9Y3D6 152 aa3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 PCYT1BQ9Y5K3 369 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P21-201ENST00000452483 NPATQ14207 1427 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 MYH15Q9Y2K3 1946 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGLV4-3A0A075B6K6 122 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 A0A096LPI6 279 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHV6-1A0A0B4J1U7 121 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGKV1-8A0A0C4DH67 115 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 LY6G6EA0A0G2JKS1 128 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 A0A0G2JN53 185 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 SIGLEC16A6NMB1 481 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 RIIAD1A6NNX1 92 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 F5H5P2 479 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 M0R1X1 148 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 GYG2O15488 501 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 RGS5O15539 181 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 KBTBD11O94819 623 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 FAM107AO95990 144 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 C8GP07360 202 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPL7P18124 248 aaKnown RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 CCL1P22362 96 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 BLVRBP30043 206 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 CMPK1P30085 196 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 WNT4P56705 351 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 DEFA3P59666 94 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 GRB2P62993 217 aaKnown RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 MEF2CQ06413 473 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 ERCC8Q13216 396 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 HTR4Q13639 388 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 C12orf74Q32Q52 190 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 FBXL19-AS1Q494R0 122 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 TNFAIP8L3Q5GJ75 292 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 TCEAL5Q5H9L2 206 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 IBA57Q5T440 356 aaKnown RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 C11orf87Q6NUJ2 197 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 DNAJC24Q6P3W2 148 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 FBXW12Q6X9E4 464 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 C11orf53Q8IXP5 236 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 PTX4Q96A99 478 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 RPUSD4Q96CM3 377 aaKnown RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF649Q9BS31 505 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 PDCD10Q9BUL8 212 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 YIPF3Q9GZM5 350 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 PBOV1Q9GZY1 135 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 PARP11Q9NR21 331 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGSF9BQ9UPX0 1349 aa3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 DNMT1P26358 1616 aaKnown RBP3.37□□□□□ -1.87
HMGB3P21-201ENST00000452483 MYH2Q9UKX2 1941 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 OVOS2A0A0J9YW53 1432 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 OVOS2Q6IE36 1432 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 PPIP5K1Q6PFW1 1433 aa3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 YLPM1P49750 1951 aaKnown RBP3.36□□□□□ -1.87
HMGB3P21-201ENST00000452483 A2MP01023 1474 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms