RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OR2M3Q8NG83 312 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 OR4F17Q8NGA8 305 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 FLVCR1-AS1Q8TAF5 88 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 ASB10Q8WXI3 467 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 CCDC3Q9BQI4 270 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 LRFN3Q9BTN0 628 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 UBE2ZQ9H832 354 aaPredicted RBP7.37□□□□□ -1.23
LSM5-208ENST00000450169 SOHLH2Q9NX45 425 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 TAAR3PQ9P1P4 343 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 NPIPA1Q9UND3 350 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 WNT6Q9Y6F9 365 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 LTBP2Q14767 1821 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 ODAMA1E959 279 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PRR19A6NJB7 356 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 TNFSF14O43557 240 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 TRAF3IP2O43734 574 aaPredicted RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 AVPP01185 164 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PPYP01298 95 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 IGKV1D-33P01593 117 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 IGKV1-33P01594 117 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 C1QTNF9P0C862 333 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 CTSEP14091 401 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 UCP1P25874 307 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 DUSP3P51452 185 aaPredicted RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 NHLH1Q02575 133 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 EIF3IQ13347 325 aaKnown RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 S100A7AQ86SG5 101 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 OR5P3Q8WZ94 311 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 SFRP2Q96HF1 295 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 RAB40CQ96S21 281 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 SLC25A22Q9H936 323 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 POLR1DQ9Y2S0 133 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 XIRP2A4UGR9 3374 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PTPRSQ13332 1948 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PHF3Q92576 2039 aaKnown RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 SZT2Q5T011 3432 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 SPTBN5Q9NRC6 3674 aaKnown RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 TMPRSS2O15393 492 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PAGE4O60829 102 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 VAMP5O95183 116 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 C3orf79P0CE67 100 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PMCHP20382 165 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 NPPCP23582 126 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 GNRHRP30968 328 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 OR1D4P47884 311 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 DAP3P51398 398 aaKnown RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 PRRX1P54821 245 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 ARG2P78540 354 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 POU3F1Q03052 451 aaPredicted RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 KIR2DS3Q14952 304 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 HNRNPA1L2Q32P51 320 aaKnown RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 PRSS57Q6UWY2 283 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 LIN37Q96GY3 246 aaPredicted RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 DGAT2Q96PD7 388 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 GNB4Q9HAV0 340 aa7.36□□□□□ -1.23
LSM5-208ENST00000450169 PHPT1Q9NRX4 125 aaPredicted RBP7.36□□□□□ -1.23
LSM5-208ENST00000450169 TMED7-TICAM2A0A0A6YYA0 188 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 EDDM13A0A1B0GTR0 161 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 OR2T8A6NH00 312 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 C17orf51A8MQB3 221 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 FCN1O00602 326 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 TM4SF5O14894 197 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 PIAS2O75928 621 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 GP1BBP13224 206 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 CCR2P41597 374 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 GFRA1P56159 465 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 HBG1P69891 147 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 HBG2P69892 147 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 DEFB103AP81534 67 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 PSG4Q00888 419 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 PRAMEF20Q5VT98 475 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 STARD5Q9NSY2 213 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 LHFPL6Q9Y693 200 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 REV3LO60673 3130 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 MYO7AQ13402 2215 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 CTXND1A0A1B0GTU2 59 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 LOC102725191A0A1B0GVB3 256 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 MDFIC2A0A1B0GVS7 189 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 KIAA1324LA8MWY0 1029 aaPredicted RBP7.35□□□□□ -1.23
LSM5-208ENST00000450169 AHRRA9YTQ3 701 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 C11orf94C9JXX5 98 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 C17orf112F2Z3M2 114 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 SMPD2O60906 423 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 SAP30O75446 220 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 S1PR2O95136 353 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 CEACAM5P06731 702 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 IL11P20809 199 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 KITLGP21583 273 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 MSR1P21757 451 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 ZNF90Q03938 601 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 DLX2Q07687 328 aaPredicted RBP7.35□□□□□ -1.23
LSM5-208ENST00000450169 ARL16Q0P5N6 197 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 FUT7Q11130 342 aa7.35□□□□□ -1.23
LSM5-208ENST00000450169 PMCHL1Q16048 86 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms