RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 A6NNC1 897 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 ADAM20O43506 726 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 TNFSF12O43508 249 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 NDUFB7P17568 137 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 UCP1P25874 307 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 LOXL3P58215 753 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 MRPS11P82912 194 aaKnown RBP11.81□□□□□ -0.52
USP39-207ENST00000450066 IFITM2Q01629 132 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 MEF2CQ06413 473 aaPredicted RBP11.81□□□□□ -0.52
USP39-207ENST00000450066 MSMO1Q15800 293 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 C17orf58Q2M2W7 97 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 GGNBP1Q5YKI7 109 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
USP39-207ENST00000450066 DRAM1Q8N682 238 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 NEU4Q8WWR8 484 aaPredicted RBP11.81□□□□□ -0.52
USP39-207ENST00000450066 EDARADDQ8WWZ3 215 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 GPHA2Q96T91 129 aa11.81□□□□□ -0.52
USP39-207ENST00000450066 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
USP39-207ENST00000450066 FXYD6-FXYD2A0A087WZ82 144 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 IGHV3-43A0A0B4J1X8 118 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 hADV38S2A0JD32 116 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 NDUFB3O43676 98 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 YPEL1O60688 119 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 RP2O75695 350 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 C1QL1O75973 258 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 CDS2O95674 445 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 IGHV3-43DP0DP04 118 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 SLC25A4P12235 298 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 PSMB6P28072 239 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 MORN2Q502X0 79 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LRRC10Q5BKY1 277 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 TMEM65Q6PI78 240 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LYPD2Q6UXB3 125 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 TCF23Q7RTU1 214 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LYZL2Q7Z4W2 148 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LHFPL5Q8TAF8 219 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 YPEL2Q96QA6 119 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 GON7Q9BXV9 100 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 GNG12Q9UBI6 72 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LINC00312Q9Y6C7 94 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 ZNF729A6NN14 1252 aaPredicted RBP11.8□□□□□ -0.52
USP39-207ENST00000450066 LYNX1G3V0Z9 82 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 MPC2O95563 127 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LYNX1P0DP58 116 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 IL15RAQ13261 267 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 IAH1Q2TAA2 248 aaPredicted RBP11.8□□□□□ -0.52
USP39-207ENST00000450066 LRRC37A5PQ49AS3 106 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 TMEM268Q5VZI3 342 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 C11orf87Q6NUJ2 197 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 MEX3BQ6ZN04 569 aaKnown RBP11.8□□□□□ -0.52
USP39-207ENST00000450066 FGFRL1Q8N441 504 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 AGMATQ9BSE5 352 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 OR2D2Q9H210 308 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 LAMP3Q9UQV4 416 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 TMED3Q9Y3Q3 217 aa11.8□□□□□ -0.52
USP39-207ENST00000450066 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 FCN3O75636 299 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 GOSR1O95249 250 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
USP39-207ENST00000450066 LTC4SQ16873 150 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 TMEM30BQ3MIR4 351 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 ZNF695Q8IW36 515 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 SLC35G3Q8N808 338 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 IL22RA2Q969J5 263 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 TAS2R3Q9NYW6 316 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 RNF150Q9ULK6 438 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 DVL1O14640 695 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 RGS13O14921 159 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 ARPC5O15511 151 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 IGHV2-70P01814 119 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 CXCL2P19875 107 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 OMGP23515 440 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 SELENOHQ8IZQ5 122 aaKnown RBP11.79□□□□□ -0.52
USP39-207ENST00000450066 THAP6Q8TBB0 222 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
USP39-207ENST00000450066 GSKIPQ9P0R6 139 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 CTSZQ9UBR2 303 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
USP39-207ENST00000450066 ITGB1BP1O14713 200 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 RPA2P15927 270 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 C4BPBP20851 252 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
USP39-207ENST00000450066 GAL3ST2Q9H3Q3 398 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 C19orf12Q9NSK7 152 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 GFOD1Q9NXC2 390 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 PSG11Q9UQ72 335 aa11.78□□□□□ -0.52
USP39-207ENST00000450066 KLF2Q9Y5W3 355 aaPredicted RBP11.78□□□□□ -0.52
USP39-207ENST00000450066 L7N2F9 121 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 SERPINE2P07093 398 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 DAOP14920 347 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 SSTR2P30874 369 aa11.77□□□□□ -0.52
USP39-207ENST00000450066 EIF4EBP1Q13541 118 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms