RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HMX3A6NHT5 357 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 TRAPPC2P0DI81 140 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 TRAPPC2BP0DI82 140 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 MMP9P14780 707 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 NFYBP25208 207 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 PPP1CCP36873 323 aaKnown RBP11.5□□□□□ -0.57
SHMT2-203ENST00000449049 Q3ZCU0 254 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 UTF1Q5T230 341 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 OR10V1Q8NGI7 309 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 TMPRSS13Q9BYE2 586 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 TMEM133Q9H2Q1 129 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 YLPM1P49750 1951 aaKnown RBP11.5□□□□□ -0.57
SHMT2-203ENST00000449049 KIAA2026Q5HYC2 2103 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 RGS11O94810 467 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 PPYP01298 95 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 AADACP22760 399 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 GATA3P23771 443 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 PRTN3P24158 256 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 CD34P28906 385 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 AADACL3Q5VUY0 350 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 METTL11BQ5VVY1 283 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 MOB3AQ96BX8 217 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 PARP12Q9H0J9 701 aaKnown RBP11.5□□□□□ -0.57
SHMT2-203ENST00000449049 SCP2D1Q9UJQ7 156 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 OR2W1Q9Y3N9 320 aa11.5□□□□□ -0.57
SHMT2-203ENST00000449049 ABCA2Q9BZC7 2435 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 ITGB1BP1O14713 200 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 SLC6A1P30531 599 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 SCGB2B2Q4G0G5 96 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 NRARPQ7Z6K4 114 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 GLCCI1Q86VQ1 547 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 SLC38A6Q8IZM9 456 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 OR13C8Q8NGS7 320 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 TERB2Q8NHR7 220 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 GRPEL2Q8TAA5 225 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 FAM216AQ8WUB2 273 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 MRGPRFQ96AM1 343 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 FXYD6Q9H0Q3 95 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 HIF1ANQ9NWT6 349 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 VPS13CQ709C8 3753 aa11.49□□□□□ -0.57
SHMT2-203ENST00000449049 OR5H14A6NHG9 310 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 CCR6P51684 374 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 VMO1Q7Z5L0 202 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 C8orf31Q8N9H6 132 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 SIRT7Q9NRC8 400 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 ITPR2Q14571 2701 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 ASH1LQ9NR48 2969 aaKnown RBP11.48□□□□□ -0.57
SHMT2-203ENST00000449049 TOX4O94842 621 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 DLX1P56177 255 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 CYB5R2Q6BCY4 276 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 LDLRAD3Q86YD5 345 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 EDARADDQ8WWZ3 215 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 PSG11Q9UQ72 335 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
SHMT2-203ENST00000449049 ARHGAP32A7KAX9 2087 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 SMAD7O15105 426 aaKnown RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 TGFAP01135 160 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 ZNF134P52741 427 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 HERV-K104P61576 105 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 RBMS2Q15434 407 aaKnown RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 HCP5Q6MZN7 132 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 SLC25A48Q6ZT89 311 aaKnown RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 OR2AK2Q8NG84 335 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 DPAGT1Q9H3H5 408 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 CSMD1Q96PZ7 3565 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 FAM240BA0A1B0GVZ2 78 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 J3QLI3 93 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 SLC31A2O15432 143 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 NDUFB6O95139 128 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 IGHV3-7P01780 117 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 M6PRP20645 277 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 ECI1P42126 302 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 LUMP51884 338 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 UCP3P55916 312 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 CT45A1Q5HYN5 189 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 NCR3LG1Q68D85 454 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 SLC51BQ86UW2 128 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 ABHD12Q8N2K0 398 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 LINC00311Q8N616 119 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 OR13D1Q8NGV5 346 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 OR9G1Q8NH87 305 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 CT45A3Q8NHU0 189 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 SLC25A21Q9BQT8 299 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-203ENST00000449049 AGMATQ9BSE5 352 aa11.47□□□□□ -0.57
SHMT2-203ENST00000449049 PCGF1Q9BSM1 259 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms