RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 TMEM140Q9NV12 185 aa2.55□□□□□ -2
CHD9-203ENST00000447540 JPT1Q9UK76 154 aa2.55□□□□□ -2
CHD9-203ENST00000447540 OR2W1Q9Y3N9 320 aa2.55□□□□□ -2
CHD9-203ENST00000447540 CA3P07451 260 aa2.55□□□□□ -2
CHD9-203ENST00000447540 AZU1P20160 251 aa2.55□□□□□ -2
CHD9-203ENST00000447540 GNG3P63215 75 aa2.55□□□□□ -2
CHD9-203ENST00000447540 PSG9Q00887 426 aa2.55□□□□□ -2
CHD9-203ENST00000447540 OR1Q1Q15612 314 aa2.55□□□□□ -2
CHD9-203ENST00000447540 NRN1LQ496H8 165 aa2.55□□□□□ -2
CHD9-203ENST00000447540 C9orf50Q5SZB4 431 aa2.55□□□□□ -2
CHD9-203ENST00000447540 OR1B1Q8NGR6 318 aa2.55□□□□□ -2
CHD9-203ENST00000447540 ADAT3Q96EY9 351 aaPredicted RBP2.55□□□□□ -2
CHD9-203ENST00000447540 SLC25A33Q9BSK2 321 aa2.55□□□□□ -2
CHD9-203ENST00000447540 SLC25A18Q9H1K4 315 aa2.55□□□□□ -2
CHD9-203ENST00000447540 IL21Q9HBE4 155 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A10PA6NDY2 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A18PA6NE21 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A16PA6NEW6 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A20PA6NIJ5 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A8PA6NJQ4 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A7PA6NKC0 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A22PA8MWA6 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A12PA8MX19 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A5PA8MXJ8 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A23PA8MXZ1 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A15PP0C7V4 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A13PP0C7W8 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A14PP0C7W9 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 FAM90A24PP0C7X0 464 aa2.55□□□□□ -2
CHD9-203ENST00000447540 APLNRP35414 380 aa2.55□□□□□ -2
CHD9-203ENST00000447540 ICAM4Q14773 271 aa2.55□□□□□ -2
CHD9-203ENST00000447540 GAGE13Q4V321 117 aa2.55□□□□□ -2
CHD9-203ENST00000447540 WIPI1Q5MNZ9 446 aaPredicted RBP2.55□□□□□ -2
CHD9-203ENST00000447540 TMEM99Q8N816 258 aa2.55□□□□□ -2
CHD9-203ENST00000447540 OR5AN1Q8NGI8 311 aa2.55□□□□□ -2
CHD9-203ENST00000447540 OR4A5Q8NH83 315 aa2.55□□□□□ -2
CHD9-203ENST00000447540 ZNF519Q8TB69 540 aa2.55□□□□□ -2
CHD9-203ENST00000447540 APOBEC4Q8WW27 367 aaKnown RBP2.55□□□□□ -2
CHD9-203ENST00000447540 NUS1Q96E22 293 aa2.55□□□□□ -2
CHD9-203ENST00000447540 YPEL4Q96NS1 127 aa2.55□□□□□ -2
CHD9-203ENST00000447540 GPR82Q96P67 336 aa2.55□□□□□ -2
CHD9-203ENST00000447540 TMEM121BQ9BXQ6 578 aaPredicted RBP2.55□□□□□ -2
CHD9-203ENST00000447540 GTSF1LQ9H1H1 148 aa2.55□□□□□ -2
CHD9-203ENST00000447540 IL36BQ9NZH7 164 aa2.55□□□□□ -2
CHD9-203ENST00000447540 BOKQ9UMX3 212 aaPredicted RBP2.55□□□□□ -2
CHD9-203ENST00000447540 KIAA1549Q9HCM3 1950 aa2.55□□□□□ -2
CHD9-203ENST00000447540 A0A1W2PP11 408 aa2.54□□□□□ -2
CHD9-203ENST00000447540 C11orf94C9JXX5 98 aa2.54□□□□□ -2
CHD9-203ENST00000447540 J3KT08 172 aa2.54□□□□□ -2
CHD9-203ENST00000447540 PPP1R3DO95685 299 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CXorf1O96002 111 aa2.54□□□□□ -2
CHD9-203ENST00000447540 FUT3P21217 361 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TM4SF1P30408 202 aa2.54□□□□□ -2
CHD9-203ENST00000447540 WBP2NLQ6ICG8 309 aa2.54□□□□□ -2
CHD9-203ENST00000447540 RHBDD2Q6NTF9 364 aa2.54□□□□□ -2
CHD9-203ENST00000447540 PQLC2Q6ZP29 291 aa2.54□□□□□ -2
CHD9-203ENST00000447540 OR2AJ1Q8NGZ0 328 aa2.54□□□□□ -2
CHD9-203ENST00000447540 MSI2Q96DH6 328 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 SPSB2Q99619 263 aa2.54□□□□□ -2
CHD9-203ENST00000447540 IFI27L2Q9H2X8 130 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SLC17A4Q9Y2C5 497 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ACACAQ13085 2346 aa2.54□□□□□ -2
CHD9-203ENST00000447540 A0A0J9YY10 115 aa2.54□□□□□ -2
CHD9-203ENST00000447540 A0A1B0GX78 115 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CXCL1P09341 107 aa2.54□□□□□ -2
CHD9-203ENST00000447540 FAM27D1Q5T7N8 215 aa2.54□□□□□ -2
CHD9-203ENST00000447540 Q6AWC8 147 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TMEM211Q6ICI0 200 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TMEM123Q8N131 208 aa2.54□□□□□ -2
CHD9-203ENST00000447540 C5orf17Q8NAS9 161 aa2.54□□□□□ -2
CHD9-203ENST00000447540 PTH2Q96A98 100 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CDX2Q99626 313 aaPredicted RBP2.54□□□□□ -2
CHD9-203ENST00000447540 LIN7CQ9NUP9 197 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 CLEC1BQ9P126 229 aa2.54□□□□□ -2
CHD9-203ENST00000447540 ZDBF2Q9HCK1 2354 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TRAV25A0A0B4J276 109 aa2.54□□□□□ -2
CHD9-203ENST00000447540 A0A0G2JLM5 398 aa2.54□□□□□ -2
CHD9-203ENST00000447540 KBTBD11-OT1A0A1B0GTJ5 212 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SMIM28A0A1B0GU29 152 aa2.54□□□□□ -2
CHD9-203ENST00000447540 LAMTOR5O43504 91 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SP9P0CG40 484 aa2.54□□□□□ -2
CHD9-203ENST00000447540 RPS28P62857 69 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 EFEMP1Q12805 493 aa2.54□□□□□ -2
CHD9-203ENST00000447540 NFATC4Q14934 902 aa2.54□□□□□ -2
CHD9-203ENST00000447540 RPS27LQ71UM5 84 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 DOK3Q7L591 496 aa2.54□□□□□ -2
CHD9-203ENST00000447540 STPG4Q8N801 248 aa2.54□□□□□ -2
CHD9-203ENST00000447540 OTOSQ8NHW6 89 aa2.54□□□□□ -2
CHD9-203ENST00000447540 TMEM45BQ96B21 275 aa2.54□□□□□ -2
CHD9-203ENST00000447540 QTRT1Q9BXR0 403 aaKnown RBP2.54□□□□□ -2
CHD9-203ENST00000447540 OSTCQ9NRP0 149 aa2.54□□□□□ -2
CHD9-203ENST00000447540 UFC1Q9Y3C8 167 aa2.54□□□□□ -2
CHD9-203ENST00000447540 R4GN57 208 aa2.54□□□□□ -2
CHD9-203ENST00000447540 THADAQ6YHU6 1953 aa2.54□□□□□ -2
CHD9-203ENST00000447540 SMIM35A0A1B0GVV1 85 aa2.54□□□□□ -2
CHD9-203ENST00000447540 CRYM-AS1A6NIL9 109 aa2.54□□□□□ -2
CHD9-203ENST00000447540 A8MWL6 223 aa2.54□□□□□ -2
CHD9-203ENST00000447540 GRXCR1A8MXD5 290 aa2.54□□□□□ -2
CHD9-203ENST00000447540 NKX2-8O15522 239 aa2.54□□□□□ -2
CHD9-203ENST00000447540 PTGER4P35408 488 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms